Job Description P04079 Confidence 52.79% Date Thu Jan 5 10:58:10 GMT 2012 Rank 214 Aligned Residues 76 % Identity 17% Template c3edoA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution Resolution 1.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.		30		.	.	.	.	.	.	.																											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure										.															.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.															.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	I	L	I	L	D	F	.	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	.	L	.	G	V	Y	C	E	L	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G
Query Conservation										.															.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.															.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																																.
Template Sequence		K	K	T	L	I	L	Y	Y	S	W	S	G	E	T	K	K	X	A	E	K	I	N	S	E	I	K	D	S	E	L	K	E	V	K	V	S	E	G	T	F	D	A	D	Y	K	T	S	D	I	A	L	D	Q	I	Q	G	N	K	D	F	P	E	I	Q	L	D	N	I	D	Y	N	N	Y	D	L	I	L	I	.	G
Template Known Secondary structure											S	S	S													S	T	T							B			T	T	S	S															T	T	S	S						B						G	G	G		S					.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	.	.	.	.	A	G	V	P	V	F	G	V	C
Query Conservation																					.	.	.	.
Alig confidence					.	.															.	.	.	.
Template Conservation					.	.
Template Sequence		S	P	V	.	.	W	S	G	Y	P	A	T	P	I	K	T	L	L	D	Q	X	K	N	Y	R	G	E	V	A	S	F	F
Template Known Secondary structure					.	.		T	T				T									T	T	T			S
Template Predicted Secondary structure					.	.
Template SS confidence
		83	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions