Job Description P04079 Confidence 99.96% Date Thu Jan 5 10:58:10 GMT 2012 Rank 21 Aligned Residues 231 % Identity 17% Template c3dpiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nad+ synthetase; PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei Resolution 2.20 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																									.	.	.																										.	.	.	.	.	.
Query SS confidence																									.	.	.																										.	.	.	.	.	.
Query Sequence		Q	C	E	A	L	W	T	P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	.	.	.	G	D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	.	.	.	.	.	.	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V
Query Conservation																									.	.	.																										.	.	.	.	.	.
Alig confidence																									.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence		H	V	S	P	T	F	D	A	R	D	E	A	E	R	R	I	G	F	V	A	D	Y	L	R	T	A	G	L	R	A	C	V	L	G	I	S	G	G	I	D	S	S	T	A	G	R	L	A	Q	L	A	V	E	R	L	R	A	S	G	Y	D	A	R	F	V	A	M	R	L	P	Y	G	A	E	A	D	A	R	R	A
Template Known Secondary structure		T			S	S																						T										S	S																				T	T												S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.																										.
Query SS confidence																															.	.	.	.	.	.	.																										.
Query Sequence		L	D	M	F	G	D	H	F	G	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	.	.	.	.	.	.	.	D	P	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	.	D	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A
Query Conservation																															.	.	.	.	.	.	.																										.
Alig confidence		.	.	.																											.	.	.	.	.	.	.																										.										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																																					.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	L	A	F	V	R	A	D	E	T	L	T	V	D	V	K	P	A	A	D	A	M	L	A	A	L	A	A	G	G	L	A	Y	L	D	H	A	Q	Q	D	F	V	L	G	N	I	K	A	R	E	R	M	I	A	Q	Y	A	V	A	G	A	R	N	G	V	V	I	G	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.							S																					T	T																																T	T				B			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
					101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	Y	D	M	L	Y	R	H	P	F	P	G	P	G	L	G	V	R	V	L	G	E	.	.	.	V	K	K	E	Y	C	D
Query Conservation																																																																								.	.	.
Alig confidence																						.	.	.	.	.	.	.																																												.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		D	H	A	A	E	S	V	M	G	F	F	T	K	F	G	D	G	G	A	D	.	.	.	.	.	.	.	V	L	P	L	A	G	L	T	K	R	R	V	R	A	L	A	R	M	L	G	A	D	E	P	L	V	L	K	T	P	T	A	D	L	E	T	L	R	P	Q	R	P	H	A	Y	G	I	T	Y	E	Q	I	D
Template Known Secondary structure																					S	.	.	.	.	.	.	.	B		T	T	T	T													T	T							T								G	G	G	S		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	R	A	D	A	I	F	I	E	E	L	R	K	A	D	L	Y	D	K	V	S	Q	A	F	T	V	F	L	P
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		D	F	L	E	G	K	P	M	D	D	A	V	A	E	T	V	L	R	F	Y	D	A	T	R	H	K	R	A	.	L	P
Template Known Secondary structure						T		S																						.
Template Predicted Secondary structure																														.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions