Job Description P04079 Confidence 99.62% Date Thu Jan 5 10:58:10 GMT 2012 Rank 75 Aligned Residues 169 % Identity 11% Template c3dlaD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don Resolution 2.35 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																		.	.	.																											.	.	.	.	.		.
Query SS confidence																		.	.	.																											.	.	.	.	.		.
Query Sequence		P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	.	.	.	G	D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	.	.	.	.	.	G	.	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H
Query Conservation																		.	.	.																											.	.	.	.	.		.
Alig confidence																		.	.	.																											.	.	.	.	.		.										.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.
Template Sequence		C	Y	E	A	Y	N	I	Q	V	S	G	L	E	Q	R	L	R	A	L	D	Y	P	K	V	V	I	G	V	S	G	G	L	D	S	T	H	A	L	I	V	A	T	H	A	M	D	R	E	G	R	P	R	S	D	I	L	A	F	A	L	P	.	.	.	.	.	.	.	.	G	F	N	N	A	I	K	L	A	R	A
Template Known Secondary structure																				T	T	S									S	S																	T	T			G	G	G								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400									.	.	.	.	.	.	.	.	.	410	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.						.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																										.
Query SS confidence																									.	.	.	.	.																										.
Query Sequence		F	G	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	.	.	.	.	.	P	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	.	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V
Query Conservation																									.	.	.	.	.																										.
Alig confidence																									.	.	.	.	.																										.									.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.
Template Sequence		L	G	V	T	F	S	E	I	D	I	G	D	T	A	R	L	M	L	H	T	I	G	H	P	Y	S	V	G	E	K	V	Y	D	V	T	F	E	N	V	Q	A	G	L	R	T	D	Y	L	F	R	I	A	N	Q	R	G	G	I	V	L	G	T	.	.	.	.	.	.	.	.	.	G	D	L	S	E	L	A	L	G
Template Known Secondary structure			T								T											T	T		G	G	G	G	T																												T							.	.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480										.	.	.	.	.	.	.	.	.
		355	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		I	K	S	.	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	Y	D	M	L	Y	R	H	P
Query Conservation					.
Alig confidence					.									.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		W	S	T	Y	G	V	G	D	Q	M	S	H	.	.	.	.	.	.	.	Y	N	V	N	A	G	V	P	K	T	L	I	Q	H	L	I	R	W	V	I	S	A	G	E	F	G	E	K	V	G
Template Known Secondary structure			S			S	S	S	T	T			S	.	.	.	.	.	.	.			S	S	T	T																		S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.								.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions