Job Description P04079 Confidence 87.80% Date Thu Jan 5 10:58:10 GMT 2012 Rank 124 Aligned Residues 67 % Identity 24% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	H	R	I	L	I	L	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	.	.	.	.	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E
Query Conservation																						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.							.
Template Conservation																																																																					.	.							.
Template Sequence		K	P	N	I	L	V	L	F	Y	G	Y	G	S	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	.	.	A	D	G	F	A	I	.	G	S	P	T
Template Known Secondary structure												S	S																	T												S		G	G	G		T	T			G	G	G	S	T	T	S		B									.	.		S					.
Template Predicted Secondary structure																																																																					.	.							.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.		.	.	.	80
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	A
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	R	Y	G	N	M	A	G	G	L	K	T	F	L	D	T
Template Known Secondary structure		.	.	B	T	T	B											T
Template Predicted Secondary structure		.	.
Template SS confidence
				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions