Job Description P04079 Confidence 99.92% Date Thu Jan 5 10:58:10 GMT 2012 Rank 43 Aligned Residues 180 % Identity 17% Template c2ywdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: crystal structure of glutamine amidotransferase Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		R	I	L	I	L	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	.	.	.	.	.	.	P	R	A	P	Q	Y	V	F	E	A	G	V	P	V
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																	.																					.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																	.																					.	.	.	.	.
Template Sequence		V	V	G	V	L	A	L	Q	G	D	F	R	E	H	K	.	E	A	L	K	R	L	G	I	E	A	K	E	V	R	K	K	E	H	L	E	.	.	.	.	.	G	L	K	A	L	I	V	P	G	G	E	S	T	T	I	G	K	L	A	R	E	Y	G	I	E	D	E	V	R	K	R	V	E	E	G	S	L	A	L
Template Known Secondary structure								S	S	S							.					T	T	T								S	G	G	G	G	T	.	.	.	.	.	T		S						S	S												T	T											T	T
Template Predicted Secondary structure																	.																					.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		F	G	V	C	Y	G	M	Q	T	M	A	M	Q	L	G	G	H	V	E	A	S	N	E	R	E	F	G	Y	A	Q	V	E	V	V	N	D	.	.	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K	P	L	L	D	V	W	M	S	H	G	D	K	V	T	A	I	P	S	D	F	I	T	V	A	S	T
Query Conservation																																						.	.
Alig confidence																			.	.	.																	.	.
Template Conservation																			.	.	.
Template Sequence		F	G	T	C	A	G	A	I	W	L	A	K	E	I	V	G	Y	.	.	.	P	E	Q	P	R	L	G	V	L	E	A	W	V	E	R	N	A	F	G	R	Q	V	E	S	F	E	E	D	L	E	V	E	G	L	G	S	F	H	G	V	F	I	R	A	P	V	F	R	R	L	G	E	G	V	E	V	L	A	R	L
Template Known Secondary structure					T											T	T		.	.	.	T	T													T	T		S			S	S	S									T	T	T									S									T	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	C	P	F	A	I	M	A	N	E	E	K	R	F	Y	G	V	Q	F	H	P	E	V	T	H	T	R	Q	G	M	R	M	L	E	R	F	V	R	D	I	C	Q	C
Query Conservation
Alig confidence											.	.	.																	.	.	.								.
Template Conservation											.	.	.																	.	.	.								.
Template Sequence		G	D	L	P	V	L	V	R	Q	.	.	.	G	K	V	L	A	S	S	F	H	P	E	L	T	E	D	P	.	.	.	R	L	H	R	Y	F	L	.	E	L	A	G	V
Template Known Secondary structure		T	T								.	.	.	T	T					S	S		G	G	G	S	S			.	.	.								.				T
Template Predicted Secondary structure											.	.	.																	.	.	.								.
Template SS confidence
		155	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.		.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions