Job Description P04079 Confidence 100.00% Date Thu Jan 5 10:58:10 GMT 2012 Rank 4 Aligned Residues 466 % Identity 51% Template c2ywcC_ PDB info PDB header:ligase Chain: C: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: crystal structure of gmp synthetase from thermus thermophilus in2 complex with xmp Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	L	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P	V	F	G	V	C	Y	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	V	L	D	F	G	S	Q	Y	T	R	L	I	A	R	R	L	R	E	L	R	A	F	S	L	I	L	P	G	D	A	P	L	E	E	V	L	K	H	R	P	Q	A	L	I	L	S	G	G	P	R	S	V	F	D	P	D	A	P	R	P	D	P	R	L	F	S	S	G	L	P	L	L	G	I	C	Y	G	X
Template Known Secondary structure							S	S		T	T											T	T								S	S								T	T			S								S	S		T	T		T	T	S					T	T	G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	M	A	M	Q	L	G	G	H	V	E	A	S	N	E	R	E	F	G	Y	A	Q	V	E	V	V	N	D	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K	P	L	L	D	V	W	M	S	H	G	D	K	V	T	A	I	P	S	D	F	I	T	V	A	S	T	E	S	C	P	F	A	I	M	A
Query Conservation
Alig confidence																														.												.	.	.	.	.	.	.	.
Template Conservation																														.												.	.	.	.	.	.	.	.
Template Sequence		Q	L	L	A	Q	E	L	G	G	R	V	E	R	A	G	R	A	E	Y	G	K	A	L	L	T	R	H	E	.	G	P	L	F	R	G	L	E	G	E	V	.	.	.	.	.	.	.	.	Q	V	W	X	S	H	Q	D	A	V	T	A	P	P	P	G	W	R	V	V	A	E	T	E	E	N	P	V	A	A	I	A
Template Known Secondary structure									T							S		S												.	S	G	G	G	T	T			S			.	.	.	.	.	.	.	.							S								T	T								T	T
Template Predicted Secondary structure																														.												.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	E	K	R	F	Y	G	V	Q	F	H	P	E	V	T	H	T	R	Q	G	M	R	M	L	E	R	F	V	R	D	I	C	Q	C	E	A	L	W	T	P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	G	D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		S	P	D	G	R	A	Y	G	V	Q	F	H	P	E	V	A	H	T	P	K	G	X	Q	I	L	E	N	F	L	.	E	L	A	G	V	K	R	D	W	T	P	E	H	V	L	E	E	L	L	R	E	V	R	E	R	A	G	K	D	R	V	L	L	A	V	S	G	G	V	D	S	S	T	L	A	L	L	L	A	K
Template Known Secondary structure			T	T	S	S					S	B		T	T	S	T	T	S	T	T										.			T	T																							T	T	S								S	S
Template Predicted Secondary structure																															.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	F	G	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V
Query Conservation
Alig confidence			.																									.
Template Conservation			.																									.
Template Sequence		A	.	G	V	D	H	L	A	V	F	V	D	H	G	L	L	R	L	G	E	R	E	E	V	E	G	.	A	L	R	A	L	G	V	N	L	L	V	V	D	A	K	E	R	F	L	K	A	L	K	G	V	E	D	P	E	E	K	R	K	I	I	G	R	E	F	V	A	A	F	S	Q	V	A	R	E	R	G	P	F
Template Known Secondary structure		T	.	T											S		S		T	T								.					T	T																	T	T																										S
Template Predicted Secondary structure			.																									.
Template SS confidence
		232		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	Y	D	M	L	Y	R	H	P	F	P	G	P	G	L	G
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	L	A	Q	G	T	L	Y	P	D	V	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	L	L	E	P	F	R	L	L	F	K	D	E	V	R	E	L	A	L	L	L	G	L	P	D	T	L	R	L	R	H	P	F	P	G	P	G	L	A
Template Known Secondary structure		S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T	T													T	T							T						T	T	G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.																											.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	L	G	E	V	K	K	E	Y	C	D	L	L	R	R	A	D	A	I	F	I	E	E	L	R	K	A	D	L	Y	D	K	V	S	Q	A	F	T	V	F	L	P	V	R	S	V	G	V	M	G	D	G	R	K	Y	D	W	V	V	S	L	R	A	V	E	T	I	D	F	M	T	A	H	W	A	H	L	P
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	V	L	G	E	V	T	E	E	R	L	E	I	L	R	R	A	D	D	I	F	T	S	L	L	R	E	W	G	L	Y	E	K	V	A	Q	A	L	A	V	L	T	P	V	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	L	A	L	R	A	V	T	T	E	D	F	X	T	A	D	W	A	R	L	P
Template Known Secondary structure		G	G	B	S	S																								T	T		G	G	G	S	S											.	.	.	.	.	.	.	.	.	.	.	.											S	S	S	S	S	B
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.													.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	F	L	G	R	V	S	N	R	I	I	N	E	V	N	G	I	S	R	V	V	Y	D	I	S	G	K	P	P	A	T	I	E	W	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	F	L	D	E	A	A	R	R	I	T	R	R	V	P	E	I	G	R	V	V	Y	D	L	T	S	K	P	P	A	T	I	E	W	E
Template Known Secondary structure																	T	T											B	T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.