Job Description P04079 Confidence 98.59% Date Thu Jan 5 10:58:10 GMT 2012 Rank 91 Aligned Residues 167 % Identity 17% Template c2wsiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:fad synthetase; PDBTitle: crystal structure of yeast fad synthetase (fad1) in complex2 with fad Resolution 1.90 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.														.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																				.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	G	D	.	.	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L
Query Conservation																				.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																								.
Template Sequence		I	R	L	T	R	K	Y	L	L	S	E	I	F	V	R	W	S	P	L	N	G	E	I	S	F	S	Y	N	G	G	K	D	C	Q	V	L	L	L	L	Y	L	S	C	L	W	E	Y	F	F	I	K	A	Q	N	S	F	P	M	Q	R	L	P	T	V	F	I	D	Q	E	E	.	T	F	P	T	L	E	N	F	V
Template Known Secondary structure												T	T	T	T	T	S		S	S	S	S	S							S																																								T	T	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	F	G	D	H	F	G	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		L	E	T	S	E	R	Y	C	L	S	L	Y	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	V	N	M	A	D	A	F	R	D	F	I	K	I	Y	P	E	T	E	A	I	V	I	G	I	R	H	T	D	.	.	.	.	.	P	F	G	E	A	L	K	P	I
Template Known Secondary structure								T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T												S	.	.	.	.	.	S	S						S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.																							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.											.	.	.	.	.	.	410
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	Y	D	M	L	Y	R	H	P	F	.	.	.	.	.	.	.	.	.	.	P	G	P	G	L	G	V
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		Q	R	T	D	S	N	W	P	D	F	M	R	.	.	.	.	.	.	L	Q	P	L	L	H	W	D	L	T	N	I	W	S	F	L	L	Y	S	N	E	P	I	C	G	L	Y	G	K	G	F	T	S	I	G	G	I	N	N	S	L	P	N	P	H	L	R	K
Template Known Secondary structure						T	T	S		S				.	.	.	.	.	.			T	T	T	T																	B						T	T		S	S				T	T	T	B		S		G	G	G	B	G
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions