Job Description P04079 Confidence 99.91% Date Thu Jan 5 10:58:10 GMT 2012 Rank 46 Aligned Residues 199 % Identity 24% Template c2w7tA_ PDB info PDB header:ligase Chain: A: PDB Molecule:putative cytidine triphosphate synthase; PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin Resolution 2.10 Å

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		9	10	.	.	.									.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																															.	.	.	.	.	.							.	.
Query SS confidence							.	.	.	.	.	.	.	.																															.	.	.	.	.	.							.	.
Query Sequence		R	I	L	I	L	.	.	.	.	.	.	.	.	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	.	.	.	.	.	.	A	Q	I	R	D	F	.	.	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P
Query Conservation							.	.	.	.	.	.	.	.																															.	.	.	.	.	.							.	.
Alig confidence							.	.	.	.	.	.	.	.																															.	.	.	.	.	.							.	.
Template Conservation
Template Sequence		R	I	A	F	V	G	K	Y	L	Q	D	A	G	D	T	Y	F	S	V	L	Q	C	F	E	H	C	Q	I	A	L	Q	V	R	L	D	I	L	Y	V	D	S	E	E	L	E	G	P	N	A	D	E	A	R	K	A	L	L	G	C	D	G	I	F	V	P	G	G	F	G	N	R	G	V	D	G	K	C	A	A	A
Template Known Secondary structure														T	T	T	T															T										G	G	G	G	S	S	T	T	T									T		S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	V	F	E	A	G	V	P	V	F	G	V	C	Y	G	M	Q	T	M	A	M	Q	L	G	G	H	V	E	A	S	N	E	R	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	A	Q	V	E	V	V	N	D	S	A	L	V	R	G
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		Q	V	A	R	M	N	N	I	P	Y	F	G	V	L	.	G	M	Q	V	A	V	I	E	L	S	R	N	V	V	G	W	S	D	A	N	S	E	E	F	N	K	E	S	T	H	Q	V	V	R	I	M	D	C	D	R	N	K	M	G	A	N	M	H	L	G	A	C	D	V	Y	I	V	E	K	S	S	I	M	A	K
Template Known Secondary structure								T								.													T	T			T	T				T	T	T		T	T		S								G	G	G	B		S	S		B														T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		125				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																											.	.	.																										.													.
Query SS confidence			.	.	.																											.	.	.																										.													.
Query Sequence		I	.	.	.	E	D	A	L	T	A	D	G	K	P	L	L	D	V	W	M	S	H	G	D	K	V	T	A	I	P	.	.	.	S	D	F	I	T	V	A	S	T	E	S	C	P	F	A	I	M	A	N	E	E	K	R	F	Y	.	G	V	Q	F	H	P	E	V	T	H	T	R	.	Q	G	M	R	M	L	E	R
Query Conservation			.	.	.																											.	.	.																										.													.
Alig confidence			.	.	.																											.	.	.																										.													.
Template Conservation
Template Sequence		I	Y	S	K	S	N	I	V	V	E	R	H	R	H	R	Y	E	V	N	T	A	Y	F	E	D	L	R	K	A	G	L	C	I	S	A	V	T	D	P	T	F	S	S	R	C	R	V	E	A	V	E	N	P	S	L	R	F	F	L	A	V	Q	F	H	P	E	F	I	S	T	P	M	D	P	A	P	T	Y	L	S
Template Known Secondary structure			T	T	T		S														G	G	G							T	T							S		T	T			T	T									T	T	S	S	S					S	S		G	G	G	S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	R	D	I	C	Q	C	E	A	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	M	A	A	A	A	K	K	D	Y	V	W
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions