Job Description P04079 Confidence 98.94% Date Thu Jan 5 10:58:10 GMT 2012 Rank 83 Aligned Residues 178 % Identity 16% Template c2oq2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:phosphoadenosine phosphosulfate reductase; PDBTitle: crystal structure of yeast paps reductase with pap, a product complex Resolution 2.10 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.							.	.	.	.
Predicted Secondary structure																																									.	.																														.	.	.	.	.	.
Query SS confidence																																									.	.																														.	.	.	.	.	.
Query Sequence		D	D	A	V	A	R	I	R	E	Q	V	G	D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	G	K	.	.	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	F	G	.	.	.	.	.	.	L	N	I	V
Query Conservation																																									.	.																														.	.	.	.	.	.
Alig confidence														.	.																										.	.											.																			.	.	.	.	.	.
Template Conservation														.	.																																						.
Template Sequence		Q	E	I	I	A	W	S	I	V	T	F	P	.	.	H	L	F	Q	T	T	A	F	G	L	T	G	L	V	T	I	D	M	L	S	K	L	S	E	K	Y	Y	M	P	E	L	L	F	I	D	T	L	.	H	H	F	P	Q	T	L	T	L	K	N	E	I	E	K	K	Y	Y	Q	P	K	N	Q	T	I	H	V	Y
Template Known Secondary structure													S	.	.	S																							T	T	S											S	.		B																T	G	G	G	T
Template Predicted Secondary structure														.	.																																						.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	P	.	.	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L
Query Conservation																				.	.
Alig confidence																				.	.																																					.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		K	P	D	G	C	E	S	E	A	D	F	A	S	K	Y	G	D	F	L	W	E	K	D	D	D	K	Y	D	Y	L	A	K	V	E	P	A	H	R	A	Y	K	E	L	H	I	S	A	V	F	T	G	R	R	K	S	Q	.	.	.	.	.	G	S	A	R	S	Q	L	S	I	I	E	I	D	E	L	N	G	I	L
Template Known Secondary structure			S	T	T		S	S										T	T														T											T	T										G	G	G	.	.	.	.	.		G	G	G	G	G			S					T	T	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	Y	D	M	L	Y	R	H	P	F	P	G	P	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	I	N	P	L	I	N	W	T	F	E	Q	V	K	Q	Y	I	D	A	N	N	V	P	Y	N	E	L	L	D	L	G	Y	R	S	I	G
Template Known Secondary structure			.	.	.	.	.	.	.			T	T	T	T													T	T					G	G	G	G	G	T		S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		183								.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions