Job Description P04079 Confidence 39.38% Date Thu Jan 5 10:58:10 GMT 2012 Rank 268 Aligned Residues 55 % Identity 16% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		7	.	.	10	.	.	.	.	.	.	.																	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Query Sequence		K	H	R	I	L	I	L	D	F	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	.	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	.	.	.	.	.	.	N	P	S	G	I	I	L	S	G	G	P	E
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Template Conservation
Template Sequence		F	P	V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	T	I	N	L	G	I	V	G	D	N	P	D	D	L	L	N	A	L	N	E	G	I	S	R	A	D	V	I	I	T	S	G	G	V	S
Template Known Secondary structure												T	T				T	T	S				T	T																	T	T											S																	S						S			S
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions