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Job DescriptionP04079
Confidence100.00%DateThu Jan 5 10:58:10 GMT 2012
Rank6Aligned Residues287
% Identity52%Templatec2dplA_
PDB info PDB header:ligaseChain: A: PDB Molecule:gmp synthase [glutamine-hydrolyzing] subunit b; PDBTitle: crystal structure of the gmp synthase from pyrococcus horikoshii ot3
Resolution1.43 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  WTPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVH
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Template Sequence  MDWGRFVEEKVREIRETVGDSKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHY
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  VPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKE
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Template Sequence  VDAQDRFFSALKGVTDPEEKRKIIGRVFIEVFEEVAKKI. GAEYLIQGTIAPL. . . . . . . . . . . . . . . . . . . . . . . . . . .
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   81........90.........100.........110......... 120.........130..
 
   368.370.........380.........390.........400.........410.........420.........430.........440.......
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Query Sequence  MKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQA
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Template Sequence  . NLKLIEPLRDLYKDEVRELAKFLGLPEKIYNRMPFPGPGLAVRVIGEVTPEKIRIVREANAIVEEEVERAGL. . RPWQA
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   154.....160.........170.........180.........190.........200.........210.........220..... ....230
 
   448.450.........460.........470.........480.........490.........500.........510.........520.....
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Query Sequence  FTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE
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Template Sequence  FAVLLGVKTVGVQGDIRAYKETIAVRIVESIDGMTANAMNVPWEVLQRIAFRITSEIPEVGRVLYDITNKPPATIEFE
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   231........240.........250.........260.........270.........280.........290.........300........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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