Job Description P04079 Confidence 79.84% Date Thu Jan 5 10:58:10 GMT 2012 Rank 136 Aligned Residues 74 % Identity 16% Template c2dlnA_ PDB info PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																		.
Query SS confidence																.	.	.	.	.	.	.	.	.																		.
Query Sequence		K	H	R	I	L	I	L	D	F	G	S	Q	Y	T	.	.	.	.	.	.	.	.	.	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	.	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F
Query Conservation																.	.	.	.	.	.	.	.	.																		.
Alig confidence									.							.	.	.	.	.	.	.	.	.																		.																									.	.	.
Template Conservation									.																																																										.	.	.
Template Sequence		T	D	K	I	A	V	L	.	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	L	H	G	R	.	.	.	G	G	E	D	G	T	L	Q	G	M	L	E
Template Known Secondary structure			S						.				S	S	T	T																		T	T								T	T	T	S		G	G	G	S	G	G	G	T										S	T	.	.	.	T	T	S	S
Template Predicted Secondary structure									.																																																										.	.	.
Template SS confidence
		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	V	P	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	G	L	P	Y	T	G
Template Known Secondary structure				T			B	S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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