Job Description P04079 Confidence 99.25% Date Thu Jan 5 10:58:10 GMT 2012 Rank 81 Aligned Residues 129 % Identity 15% Template c1vbkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 Resolution 1.90 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	F	G	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A
Query Conservation
Alig confidence														.												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	R	M	I	G	I	L	H	D	E	L	.	S	A	L	A	I	F	L	M	M	K	R	.	G	V	E	V	I	P	V	Y	I	G	K	D	D	K	N	L	E	K	V	R	S	L	W	N	L	L	K	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	G	S
Template Known Secondary structure		T								S	S			.											B	.	T									S		S	S															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure														.												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																							.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K
Query Conservation
Alig confidence																						.															.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																						.															.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		K	G	F	L	V	V	A	E	S	F	D	R	V	L	K	L	I	R	D	F	.	G	V	K	G	V	I	K	G	L	R	P	N	D	L	.	.	.	.	.	.	.	.	.	.	.	.	N	S	E	V	S	E	I	T	E	D	F	.	K	M	F	P	V	P	V	Y	Y	P	L	I	A	L	P	E	E	Y	I	K	S
Template Known Secondary structure									S	S												.	T										G	G	G		.	.	.	.	.	.	.	.	.	.	.	.		T	T									.				S	S									S
Template Predicted Secondary structure																						.															.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.													.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		387	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L	E	L	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	E	R	L	G	L
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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