Job Description P04079 Confidence 98.70% Date Thu Jan 5 10:58:10 GMT 2012 Rank 90 Aligned Residues 189 % Identity 19% Template c1q15A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:cara; PDBTitle: carbapenam synthetase Resolution 2.30 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		T	P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	.	.	.	.	.	G	D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	F	G	L
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																										.										.	.														.
Template Conservation																																																	.										.	.														.
Template Sequence		P	R	E	P	L	L	A	L	I	D	R	Y	L	N	A	P	L	E	D	L	A	P	R	F	D	T	V	G	I	P	L	S	G	G	L	D	S	S	L	V	T	A	L	A	S	R	H	.	F	K	K	L	N	T	Y	S	I	.	.	G	T	E	L	S	N	E	F	E	F	S	Q	Q	.	V	A	D	A	L	G	T
Template Known Secondary structure																						G	G	G		S								S	S											T	T	T	.		S								.	.			T	T	B									.						T
Template Predicted Secondary structure																																																	.										.	.														.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290
		284	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure									.																		.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																		.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	V	H	V	P	A	.	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A	K	.	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.																		.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																		.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	H	Q	M	K	I	L	S	E	T	E	V	I	N	G	I	I	E	S	I	Y	Y	N	E	I	F	D	G	L	S	A	E	I	Q	S	G	L	F	N	V	Y	R	Q	A	Q	G	Q	V	S	C	M	L	T	G	Y	G	S	D	L	L	F	G	G	I	L	K	P	G	A	Q	Y	D	N	P	N	Q	L	L	A	E
Template Known Secondary structure																																														B	T	T	B	S						T	T						T	T	T	S		T	T				S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
							346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.						.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.
Predicted Secondary structure		.	.	.	.	.																														.	.	.	.	.					.	.	.	.	.															.
Query SS confidence		.	.	.	.	.																														.	.	.	.	.					.	.	.	.	.															.
Query Sequence		.	.	.	.	.	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	.	.	.	.	.	P	L	K	E	.	.	.	.	.	L	F	K	D	E	V	R	K	I	G	L	E	L	G	.	L	P	Y	D	M	L	Y	R	H
Query Conservation		.	.	.	.	.																														.	.	.	.	.					.	.	.	.	.															.
Alig confidence		.	.	.	.	.																														.	.	.	.	.					.	.	.	.	.															.
Template Conservation
Template Sequence		Q	V	Y	R	T	R	W	T	G	E	F	A	T	H	G	A	S	C	Y	G	I	D	I	R	H	P	F	W	S	H	S	L	I	S	L	C	H	A	L	H	P	D	Y	K	I	F	D	N	E	V	K	N	I	L	R	E	Y	A	D	S	L	Q	L	L	P	K	D	I	V	W	R	S
Template Known Secondary structure										S	T	T								T	T						T	T											T	B		G	G	G	T			T	T			S										T	S		S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions