Job Description P04079 Confidence 99.65% Date Thu Jan 5 10:58:10 GMT 2012 Rank 74 Aligned Residues 150 % Identity 16% Template c1kh2D_ PDB info PDB header:ligase Chain: D: PDB Molecule:argininosuccinate synthetase; PDBTitle: crystal structure of thermus thermophilus hb82 argininosuccinate synthetase in complex with atp Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																								.																			.	.	.	.	.	.	.
Query SS confidence																																																								.																			.	.	.	.	.	.	.
Query Sequence		K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	F	G	.	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	.	.	.	.	.	.	.
Query Conservation																																																								.																			.	.	.	.	.	.	.
Alig confidence																																							.	.	.															.																			.	.	.	.	.	.	.
Template Conservation																																							.	.	.
Template Sequence		K	I	V	L	A	Y	S	G	G	L	D	T	S	I	I	L	K	W	L	K	E	T	Y	R	A	E	V	I	A	F	T	A	D	I	G	Q	G	.	.	.	E	E	V	E	E	A	R	E	K	A	L	R	T	G	A	S	K	A	I	A	L	D	L	K	E	E	F	V	R	D	F	V	F	P	M	M	R	A	G	A
Template Known Secondary structure									S	S																									S	S	S	S	.	.	.														T		S															T							T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
			301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	N	D	P	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L
Query Conservation		.
Alig confidence		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	E	G	Y	Y	L	L	G	T	S	I	A	R	P	L	I	A	K	H	L	V	R	I	A	E	E	E	G	A	E	A	I	A	H	G	A	T	G	K	G	N	D	Q	V	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	T	A	Y	A	L	K	P	D	I	K	V	I	A	P	W	R	E	W
Template Known Secondary structure			B	T	T	T	B			T	T	T	T																	T		S								T	T	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.														.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
					380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		S	F	Q	G	R	K	E	M	I	A	Y	A	E	A	H	G	I	P
Template Known Secondary structure					S											T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions