Return to main results Retrieve Phyre Job Id

Job DescriptionP41441
Confidence12.77%DateThu Jan 5 12:01:31 GMT 2012
Rank17Aligned Residues53
% Identity13%Templated1xa6a1
SCOP infoGTPase activation domain, GAP GTPase activation domain, GAP BCR-homology GTPase activation domain (BH-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160
Predicted Secondary structure 








Query SS confidence 




















































Query Sequence  GHPLSDALQHFPTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKL
Query Conservation 
 


 

       
     

  

 

 
   
   
            
Alig confidence 




















































Template Conservation 
  
          

 

      
   
   




  
    
  
    
Template Sequence  CCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAF
Template Known Secondary structure  TS
T
SS
S
SSSTTTTTS


Template Predicted Secondary structure 





















Template SS confidence 




















































   274.....280.........290.........300.........310.........320......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions