Job Description P41441 Confidence 4.21% Date Thu Jan 5 12:01:31 GMT 2012 Rank 73 Aligned Residues 88 % Identity 10% Template c3ipdB_ PDB info PDB header:exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21 Resolution 4.80 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	V	L	N	Q	V	R	S	A	I	L	E	G	H	P	L	S	D	A	L	Q	H	F	P	T	L	F	D	S	L	Y	R	T	L	V	K	A	G	E	K	S	G	L	L	A	P	V	L	E	K	L	A	D	Y	N	E	N	R	Q	K	I	R	S	K	L	I	Q	S	L	I	Y	P	C	M	L	T	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	T	R	H	S	E	I	I	K	L	E	N	S	I	R	E	L	H	D	M	F	M	D	M	A	M	L	V	E	S	Q	G	E	M	I	D	R	I	E	Y	N	V	E	H	A	V	D	Y	V	E	R	A	V	S	D	T	K	K	A	V	K	Y	Q	S	K	A	R	R	K	K	I	M	I	I	I	C	C	V	I
Template Known Secondary structure																									T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		174	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	G	V	V	I	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	I	I	I	A	S	T
Template Known Secondary structure				T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions