Job Description P41441 Confidence 4.32% Date Thu Jan 5 12:01:31 GMT 2012 Rank 71 Aligned Residues 126 % Identity 10% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	N	Q	V	R	S	A	I	L	E	G	H	P	L	S	D	A	L	Q	H	F	P	T	L	F	D	S	L	Y	R	T	L	V	K	A	G	E	K	S	G	L	L	A	P	V	L	E	K	L	A	D	Y	N	E	N	R	Q	K	I	R	S	K	L	I	Q	S	L	I	Y	P	C	M	L	T	T	V	A	I	G
Query Conservation
Alig confidence																								.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	E	R	I	K	E	E	L	R	A	G	K	K	L	R	Q	A	I	P	E	G	.	.	.	F	R	H	S	T	L	T	I	M	D	V	N	I	A	H	L	L	A	A	A	A	L	Y	Q	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	P	V	R	G	F	A	V	I	L	A	I	G	V	V
Template Known Secondary structure												T	T											.	.	.																									T		.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																								.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.				.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.														.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	I	L	L	T	A	V	V	P	K	I	T	E	Q	F	V	H	M	K	Q	Q	L	P	L	S	T	R	I	L	L	G	L	S	D	T	L	Q	R	T	G	P	T	L	L	A	T	V	F	I	V	A	V	G	F	W	L	W	L	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	V	F	S	N	L	V	F	S	R	H	L	L	E	R	L	A	D	R	G	E	I	R	P	P	M	W	L	V	D	P	R	F	N	F	M	G	P	A	R	Y	V	T	A	A	T	L	L	L	A	A	L	A	A	G	V	V	F	A	K	G
Template Known Secondary structure																						T														S	T	T	T	T																							T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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