Job Description P41441 Confidence 5.64% Date Thu Jan 5 12:01:31 GMT 2012 Rank 41 Aligned Residues 52 % Identity 21% Template c1n54A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:80 kda nuclear cap binding protein; PDBTitle: cap binding complex m7gpppg free Resolution 2.72 Å

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		331	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure											.																					.	.	.	.										.	.
Query SS confidence											.																					.	.	.	.										.	.
Query Sequence		M	V	A	S	G	E	K	S	G	.	Q	L	G	T	L	M	V	R	A	A	D	N	Q	E	T	L	Q	Q	N	R	.	.	.	.	I	A	L	T	L	S	I	F	E	.	.	P	A	L	I	I	T	M	A	L	I	V	L	F	I
Query Conservation											.																					.	.	.	.										.	.
Alig confidence											.																					.	.	.	.										.	.
Template Conservation
Template Sequence		I	C	K	V	G	E	K	S	A	C	S	L	E	S	N	L	E	G	L	A	G	V	L	E	A	D	L	P	N	Y	K	S	K	I	L	R	L	L	C	T	V	A	R	L	L	P	E	K	L	T	I	Y	T	T	L	V	G	L	L
Template Known Secondary structure							S			S	S															T	T	S	T	T	T																G	G	G
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions