Job Description P0AFL9 Confidence 84.23% Date Thu Jan 5 11:26:42 GMT 2012 Rank 22 Aligned Residues 34 % Identity 18% Template c3k7aM_ PDB info PDB header:transcription Chain: M: PDB Molecule:transcription initiation factor iib; PDBTitle: crystal structure of an rna polymerase ii-tfiib complex Resolution 3.80 Å

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		10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		H	I	L	C	S	Q	C	D	.	M	L	V	A	L	P	R	L	E	H	G	Q	K	A	A	C	P	R	C	G	T	T	L	T	V	A
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		V	L	T	C	P	E	C	K	V	Y	P	P	K	I	V	E	R	F	S	E	G	D	V	V	C	A	L	C	G	L	V	L	S	D	K
Template Known Secondary structure						S	T	T			S								S	S	S		S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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