Job Description P0AFL9 Confidence 54.66% Date Thu Jan 5 11:26:42 GMT 2012 Rank 93 Aligned Residues 42 % Identity 26% Template c2yucA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:tnf receptor-associated factor 4; PDBTitle: solution structure of the traf-type zinc finger domains2 (102-164) from human tnf receptor associated factor 4 Resolution UNK

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		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.		.	30							.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure									.	.									.														.			.	.	.	.	.	.
Query SS confidence									.	.									.														.			.	.	.	.	.	.
Query Sequence		M	C	E	H	H	H	A	.	.	A	K	H	I	L	C	S	Q	.	C	D	M	L	V	A	L	P	R	L	E	H	G	.	Q	K	.	.	.	.	.	.	A	A	C	P	R	C	G	T	T	L	T	V
Query Conservation									.	.									.														.			.	.	.	.	.	.
Alig confidence									.	.									.														.			.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	G	H	L	N	T	C	S	F	N	V	I	P	C	P	N	R	C	P	M	K	L	S	R	R	D	L	P	A	H	L	Q	H	D	C	P	K	R	R	L	K	C	E	F	C	G	C	D	F	S	G
Template Known Secondary structure			S									S			B		T	T			S		B			S	S	S	S	T	T	T	T	T	T	S		T	T	S					S	S	S
Template Predicted Secondary structure
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions