 |
Job Description | P0AFL9 | Confidence | 23.80% | Date | Thu Jan 5 11:26:42 GMT 2012 |
Rank | 161 | Aligned Residues | 35 |
% Identity | 17% | Template | c2corA_ |
PDB info |
PDB header:structural protein | Chain: A: PDB Molecule:pinch protein; |
PDBTitle: solution structure of the third lim domain of particularly2 interesting new cys-his protein
|
Resolution | UNK |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | S | Q | C | D | M | L | V | A | L | P | R | L | E | H | G | Q | K | A | A | C | P | R | C | G | T | T | L | T | V | A | W | D | A | P |
Query Conservation |   |
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
C | A | N | C | G | K | E | L | T | A | D | A | R | E | L | K | G | E | L | Y | C | L | P | C | H | D | K | M | G | V | S | G | P | S | S |
Template Known Secondary structure |   |
| S | S | S |
|
| B |
|
| T | T |
|  |  |  | T | T |  |  |  |
|  |  |  |  |  | T | T | S |
|
| S | S |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|