 |
Job Description | P10908 | Confidence | 51.44% | Date | Thu Jan 5 11:32:27 GMT 2012 |
Rank | 85 | Aligned Residues | 87 |
% Identity | 20% | Template | d2flia1 |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| D-ribulose-5-phosphate 3-epimerase
|
Resolution | 1.80 |
|
 |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
. | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
| . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | E | I | D | A | L | E | A | A | Q | Q | A | A | P | E | L | P | R | G | L | L | L | D | E | W | R | D | D | W | R | E | L | T | A | R | L | G | C | V | S | I | H | L | N | H | K | L | L | N | . |
. |
K | A | R | V | M | Q | L | K | D | A | G | L | R | I | L | . |
V | Y | T | V | N | K | P | Q | R | A | A | E |
Query Conservation |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   | . |   |
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
S | F | G | A | D | V | V | A | S | M | R | K | H | S | K | L | V | F | D | C | H | L | M | V | V | D | P | E | R | Y | V | E | A | F | A | Q | A | G | A | D | I | M | T | I | H | T | E | S | T | R | H | I | H | G | A | L | Q | K | I | K | A | A | G | M | K | A | G | V | V | I | N | P | G | T | P | A | T | A | L | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  | S | S | S | G | G | G | G |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | G | G | G |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |
| T | T | S |
| G | G | G | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
  |   |
224 | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | R | W | G | V | D | C | I | C |
Query Conservation |   |
  |   |   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
P | L | L | D | L | V | D | Q | V | L |
Template Known Secondary structure |   |
G | G | T | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
127 | . | . | 130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|