Job Description P10908 Confidence 100.00% Date Thu Jan 5 11:32:27 GMT 2012 Rank 17 Aligned Residues 226 % Identity 15% Template c3rlhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:sphingomyelin phosphodiesterase d lisictox-alphaia1a; PDBTitle: crystal structure of a class ii phospholipase d from loxosceles2 intermedia venom Resolution 1.72 Å

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		6	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure					.																																																		.	.	.
Query SS confidence					.																																																		.	.	.
Query Sequence		Y	P	R	.	I	V	A	H	R	G	G	G	K	L	A	P	E	N	T	L	A	S	I	D	V	G	A	K	Y	G	H	K	M	I	E	F	D	A	K	L	S	K	D	G	E	I	F	L	L	H	D	D	N	.	.	.	L	E	R	T	S	N	G	W	G	V	A	G	E	L	N	W	Q	D	L	L	R	V	D	A
Query Conservation					.																																																		.	.	.
Alig confidence					.						.	.	.	.	.	.	.																																						.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		R	P	I	W	I	M	G	H	M	.	.	.	.	.	.	.	V	N	A	I	G	Q	I	D	E	F	V	N	L	G	A	N	S	I	E	T	D	V	S	F	D	D	N	A	N	P	E	Y	T	Y	H	G	I	P	C	D	C	G	R	N	C	K	K	Y	E	N	F	N	D	F	L	K	G	L	R	S	A	T	T	P
Template Known Secondary structure									S		.	.	.	.	.	.	.			S										T	T		S								B		T	T	S		B		B					S	S			T	T	S		S					B												T	S	T
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.								.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	S	W	Y	S	K	M	F	K	G	E	P	L	P	L	L	S	Q	V	A	E	R	C	R	E	H	G	M	M	A	N	I	E	I	K	P	T	T	G	T	G	P	L	T	G	K	M	V	A	L	A	A	R	E	L	W	A	G	M	T	P	P	L	L	S	S	F	E	I	D	A	L	E	A	A	Q	Q	A	.	.
Query Conservation																																																																																.	.
Alig confidence									.	.																		.	.	.	.	.	.	.																																														.	.
Template Conservation									.	.																		.	.	.	.	.	.	.
Template Sequence		G	N	S	K	Y	Q	E	.	.	K	L	V	L	V	V	F	D	L	K	T	G	S	L	Y	D	N	.	.	.	.	.	.	.	Q	A	N	D	A	G	K	K	L	A	K	N	L	L	Q	H	Y	W	N	N	G	N	N	G	G	R	A	Y	I	V	L	S	I	P	D	L	N	H	Y	P	L	I	K	G	F	K	D
Template Known Secondary structure		T	S	T	T			T	.	.	T										G	G	G	S		G	G	.	.	.	.	.	.	.	G																T	S	G	G	G	S	S											S		G	G	G	T
Template Predicted Secondary structure									.	.																		.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
												160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.														.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	P	E	L	P	R	G	L	L	L	D	E	W	R	D	D	W	R	E	L	T	A	R	L	G	C	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	L	N	H	K	L	L	N	K	A	R	V	M	Q	L	K	D	A	G	L	R	I	L	V	Y	T	V	N
Query Conservation		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	T	K	D	G	H	P	E	L	M	D	K	V	G	H	D	F	S	G	N	D	D	I	G	D	V	G	K	A	Y	K	K	A	G	I	T	G	H	I	W	Q	S	D	G	I	T	N	C	L	P	R	G	L	S	R	V	N	A	A	V	A	N	R	D	S	A	N	G	F	I	N	K	V	Y	Y	W	T	V	D
Template Known Secondary structure						T	T		G	G	G	G	G	G							S															T			S										T	T	S				S											T	S	T	T				S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	Q	R	A	A	E	L	L	R	W	G	V	D	C	I	C	T	D	A	I	D	V	I	G	P	N	F	T	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	S	T	T	R	D	A	L	D	A	G	V	D	G	I	M	T	N	Y	P	D	V	I	T	D	V	L	N	E	A
Template Known Secondary structure		S											T		S					S										T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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