Job Description P10908 Confidence 93.32% Date Thu Jan 5 11:32:27 GMT 2012 Rank 31 Aligned Residues 134 % Identity 15% Template c3pfmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf Resolution 2.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.
Query Sequence		L	S	Q	V	A	E	R	C	R	E	H	G	M	M	A	N	I	E	I	K	P	T	T	G	T	G	P	L	T	G	K	M	V	A	L	A	A	R	E	L	W	A	G	M	T	P	P	L	L	S	S	F	E	I	.	.	.	.	.	.	.	.	.	D	A	L	E	A	A	Q	Q	A	A	P	E	L	P	R	G	L
Query Conservation																																																								.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																																																										.	.
Template Sequence		L	E	Q	V	L	R	Q	X	A	S	H	E	D	C	L	A	L	N	L	S	A	A	T	L	A	D	P	H	A	L	N	R	V	F	E	I	L	R	Q	H	S	D	L	G	P	R	L	T	L	E	I	G	E	E	Q	L	P	E	Q	A	X	L	E	Q	L	T	R	R	L	R	E	L	.	.	G	F	S	L	S	L
Template Known Secondary structure									G	G	G																														T	G	G	G	T	T	T							S	S	S																		.	.	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.			.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.													.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	D	E	W	R	D	D	W	R	E	L	T	A	R	L	G	C	V	S	I	H	L	N	H	K	L	L	N	.	.	.	.	.	.	.	.	.	.	.	.	K	A	R	V	M	Q	L	K	D	A	G	L	R	I	L	V	Y	T	V	N	K	P	Q	R	A	A	E	L	L	R	W	G	V	D	C	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	F	G	G	R	F	S	X	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	D	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L	I	A	E	R	V	E	T	E	G	E	L	Q	V	I	R	E	X	G	L	Y	G	V
Template Known Secondary structure					T	T	T	G	G	G	G	G	G					T		S						G	G	G	G	T	T	T	T	T		T																T	T										S											T		S
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions