Job Description P10908 Confidence 100.00% Date Thu Jan 5 11:32:27 GMT 2012 Rank 6 Aligned Residues 246 % Identity 23% Template c3l12A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (yp_165505.1) from silicibacter pomeroyi dss-3 at3 1.60 a resolution Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.											.	.	.	70	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	W	P	Y	P	R	I	V	A	H	R	G	G	G	K	L	A	P	E	N	T	L	A	S	I	D	V	G	A	K	Y	G	H	K	M	I	E	F	D	A	K	L	S	K	D	G	E	I	F	L	L	H	D	D	N	L	E	R	T	S	N	G	W	G	.	.	.	.	.	.	.	.	.	.	V	A	G	E	L
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	P	S	V	V	R	V	I	G	H	R	G	A	R	G	V	X	P	E	N	T	L	E	G	F	A	F	T	L	A	A	G	V	R	A	L	E	F	D	V	V	X	T	A	D	G	V	P	V	V	T	H	N	H	H	L	A	N	A	X	T	R	D	G	Q	G	H	W	L	T	G	A	E	R	Q	V	A	E	X
Template Known Secondary structure			B	T	T	B							T	T	T	T	T	T	S		T	T											T	T												T	T	S						S	S	S	B			T	T	T		B		T	T	S		B			S	S			B	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.												.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.																														.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.																														.	.	.
Query Sequence		N	W	Q	D	L	L	R	V	D	A	G	S	W	Y	S	K	.	.	.	.	.	.	.	.	.	.	.	M	F	K	G	E	P	L	P	L	L	S	Q	V	A	E	R	C	R	.	.	.	E	H	G	M	M	A	N	I	E	I	K	P	T	T	G	T	G	P	L	T	G	K	M	V	A	L	A	A	R	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.																														.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.																														.	.	.
Template Conservation
Template Sequence		T	Y	A	E	I	R	A	L	D	V	G	G	L	D	G	R	T	V	Y	G	R	R	F	P	D	Q	A	F	L	T	G	I	H	V	P	R	L	G	E	L	L	D	L	C	A	G	Y	G	D	Q	A	P	Y	L	L	L	E	L	K	S	D	P	A	L	X	H	D	H	A	A	R	A	E	X	V	A	A	V	L	A
Template Known Secondary structure								T	S	B		S	S			T	T	S						S	T	T	S				S	S					B										T	T	G	G	G												G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
				135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.									.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.																																									.	.	.	.	.	.	.	.
Query SS confidence		.	.																																									.	.	.	.	.	.	.	.
Query Sequence		.	.	E	L	W	A	G	M	T	P	P	L	L	S	S	F	E	I	D	A	L	E	A	A	Q	Q	A	A	P	E	L	P	R	G	L	L	L	D	E	W	R	D	.	.	.	.	.	.	.	.	D	W	R	E	L	T	A	R	L	G	C	V	S	I	H	L	N	H	K	L	L	N	K	A	R	V	M	Q	L	K
Query Conservation		.	.																																									.	.	.	.	.	.	.	.
Alig confidence		.	.																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	R	R	Y	R	X	E	P	R	T	V	X	H	S	F	D	W	A	L	L	G	E	C	R	R	Q	A	P	D	L	P	T	S	Y	L	S	Q	L	P	E	G	P	D	Y	D	R	X	T	E	S	L	P	Q	A	V	A	S	A	G	G	Q	L	W	C	P	Y	F	L	D	V	T	P	E	L	V	A	E	A	H
Template Known Secondary structure						T	T		G	G	G						S													T	T	S														T	T	T			S										T		S					B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	G	L	R	I	L	V	Y	T	V	N	K	P	Q	R	A	A	E	L	L	R	W	G	V	D	C	I	C	T	D	A	I	D	V	I	G	P	N	F	T	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	G	L	I	V	L	T	W	T	V	N	E	P	E	D	I	R	R	X	A	T	T	G	V	D	G	I	V	T	D	Y	P	G	R	T	Q	R	I	L	I	D	X
Template Known Secondary structure			T	T						B				S											T		S					S												T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions