Job Description P10908 Confidence 100.00% Date Thu Jan 5 11:32:27 GMT 2012 Rank 16 Aligned Residues 233 % Identity 18% Template c3i10A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (np_812074.1) from bacteroides thetaiotaomicron3 vpi-5482 at 1.35 a resolution Resolution 1.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	R	I	V	A	H	R	G	G	G	K	L	A	P	E	N	T	L	A	S	I	D	V	G	A	K	Y	G	H	K	M	I	E	F	D	A	K	L	S	K	D	G	E	I	F	L	L	H	D	D	N	L	E	R	T	S	N	G	W	G	V	A	G	E	L	N	W	Q	D	L	L	R	V	D	A	G	S	W	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	L	V	V	A	H	R	G	N	W	R	S	A	P	E	N	S	T	A	A	I	D	S	A	I	A	X	K	V	D	I	V	E	I	D	I	Q	K	T	K	D	G	Q	L	I	L	X	H	D	N	T	L	D	R	T	T	T	G	K	G	E	I	K	N	W	T	L	A	D	I	K	K	L	K	L	K	D	K	D
Template Known Secondary structure		S							T	S		T	T	T	S		T	T	S										T	T		S										T	T	S						S	S	S	B	S	T	T	T	B	S			S	B	G	G	G	S						T	T	S		B	B		T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	M	F	K	G	E	P	L	P	L	L	S	Q	V	A	E	R	C	R	E	H	G	M	M	A	N	I	E	I	K	P	T	T	G	T	G	P	L	T	G	K	M	V	A	L	A	A	R	E	L	W	A	G	M	T	P	P	L	L	S	S	F	E	I	D	A	L	E	A	A	Q	Q	A	A	P	E	L	P	R
Query Conservation
Alig confidence			.																					.										.	.	.	.	.														.	.
Template Conservation			.																					.										.	.	.	.	.														.	.
Template Sequence		G	.	K	V	T	N	Y	V	V	P	T	L	E	E	A	L	L	T	A	K	G	K	.	I	X	V	N	L	D	K	A	Y	.	.	.	.	.	D	I	F	D	D	V	Y	A	I	L	E	K	T	.	.	E	T	Q	N	Q	V	I	X	K	G	G	Q	P	I	E	T	V	K	R	E	F	G	S	Y	L	D	K	V
Template Known Secondary structure		S	.		B		S					B									T	T	T	.	S						S		G	.	.	.	.	.	G	G												.	.	T		G	G	G						S	S										G	G	G	T	T	T	S
Template Predicted Secondary structure			.																					.										.	.	.	.	.														.	.
Template SS confidence
		120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.																.	.	.	.	220	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	L	L	D	E	W	R	D	D	W	R	E	L	T	A	R	L	.	.	.	.	.	.	.	.	.	G	C	V	S	I	H	L	N	H	K	L	L	N	K	A	R	V	M	Q	L	K	D	A	G	L	R	I	L	V	Y	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	P	Q	R	A
Query Conservation																				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	X	P	V	I	D	L	G	N	K	E	A	E	K	I	I	T	D	Y	L	K	E	L	R	P	A	A	F	E	I	I	Y	S	D	P	K	N	P	L	P	P	K	I	K	Q	L	L	F	K	K	S	L	I	W	Y	N	T	L	W	G	S	L	A	G	N	H	D	D	N	L	A	L	T	D	P	E	K	S	Y
Template Known Secondary structure									T	T	S	T	T												T			S						B			T	T		S	S									T	T	T	S							S	S	G	G	G	B	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		222	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	E	L	L	.	R	W	G	V	D	C	I	C	T	D	A	I	D	V	I	G	P	N	F	T	A	Q
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		G	Y	L	I	E	Q	L	G	A	R	I	L	Q	T	D	Q	P	A	Y	L	L	D	Y	L	R	K	K
Template Known Secondary structure							T	T								S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions