Job Description P77368 Confidence 100.00% Date Thu Jan 5 12:28:15 GMT 2012 Rank 4 Aligned Residues 153 % Identity 27% Template c2evvD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein hp0218; PDBTitle: crystal structure of the pebp-like protein of unknown function hp02182 from helicobacter pylori Resolution 2.59 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50											.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		A	F	Q	V	T	S	N	E	I	K	T	G	E	Q	L	T	T	S	H	V	F	S	G	F	G	C	E	G	G	N	.	.	.	.	.	.	.	.	.	.	T	S	P	S	L	T	W	S	G	V	P	E	G	T	K	S	F	A	V	T	V	Y	D	P	D	A	P	.	.	T	G	S	G	W	W	H	W	T	V	V
Query Conservation																																.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence														.						.	.	.	.	.								.	.	.	.	.	.	.	.	.	.												.																.	.
Template Conservation														.						.	.	.	.	.																													.
Template Sequence		T	F	E	V	X	I	Q	T	D	S	K	G	.	Y	L	D	A	K	.	.	.	.	.	F	G	G	N	A	P	K	A	F	L	N	S	N	G	L	P	T	Y	S	P	K	I	S	W	Q	K	V	E	.	G	A	Q	S	Y	A	L	E	L	I	D	H	D	A	Q	K	V	C	G	X	P	F	V	H	W	V	V	G
Template Known Secondary structure											T	T	S	.	B			G	G	.	.	.	.	.	G	S	T	T	S		G	G	G	S		T	T	S														T	.	T		S									G	G	G					S	S
Template Predicted Secondary structure														.						.	.	.	.	.																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	P	A	T	V	T	Y	L	P	V	D	.	.	.	.	.	.	.	.	.	.	.	.	A	G	R	R	D	G	T	K	L	P	T	G	A	V	Q	G	R	N	D	F	G	Y	A	G	F	G	G	A	C	P	P	K	G	D	K	P	H	H	Y	Q	F	K	V	W	A	L	K	T	E	K	I	P	V	D	S	N
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation																																																									.	.
Template Sequence		N	I	A	H	N	V	L	E	E	N	A	S	X	X	D	K	R	I	V	Q	G	V	N	S	L	T	Q	G	F	I	R	S	P	L	N	E	S	E	K	Q	R	S	N	L	N	N	S	V	Y	I	G	P	X	P	P	.	.	N	G	D	H	H	Y	L	I	Q	V	Y	A	L	D	I	P	K	L	A	L	K	A	P
Template Known Secondary structure					S	S				T	T						S	S							T	T		S		S	T	T	S	S	S												T	S	S							S	.	.	S	S												S	S	S						S	S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	G	A	L	V	G	Y	M	L	N	A	N	K	I	A	T	A	E	I	T	P	V	Y	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	L	G	D	L	H	D	K	X	R	N	H	I	I	A	I	G	R	K	E	F	L	Y	K	Q
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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