Job Description P77368 Confidence 99.73% Date Thu Jan 5 12:28:15 GMT 2012 Rank 9 Aligned Residues 134 % Identity 22% Template c1wkpA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:flowering locus t protein; PDBTitle: flowering locus t (ft) from arabidopsis thaliana Resolution 2.60 Å

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		17	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																																									.	.	.	.	.
Query SS confidence											.	.																																																									.	.	.	.	.
Query Sequence		A	Q	A	A	A	F	Q	V	T	.	.	S	N	E	I	K	T	G	E	Q	L	T	T	S	H	V	F	S	G	F	G	C	E	G	G	N	T	S	P	S	L	T	W	S	G	V	P	E	G	T	K	S	F	A	V	T	V	Y	D	P	D	A	P	T	G	S	G	.	.	.	.	.	W	W	H	W	T	V	V	N
Query Conservation											.	.																																																									.	.	.	.	.
Alig confidence											.	.														.	.	.	.	.	.	.	.	.														.																					.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.														.
Template Sequence		N	R	S	I	T	L	K	V	T	Y	G	Q	R	E	V	T	N	G	L	N	L	R	P	S	.	.	.	.	.	.	.	.	.	Q	V	Q	N	K	P	R	V	E	I	G	G	E	.	D	L	R	N	F	Y	T	L	V	M	V	D	P	D	V	P	S	P	S	N	P	H	L	R	E	Y	L	H	W	L	V	T	D
Template Known Secondary structure					S							T	T					T	T					G	G	.	.	.	.	.	.	.	.	.	G	S	S	S									S	.	S	T	T										T	T		S		T	T	S		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.														.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		I	P	A	T	V	T	Y	L	P	V	D	A	G	R	R	D	G	T	K	L	P	T	G	A	V	Q	G	R	N	D	F	G	Y	A	G	F	G	G	A	C	P	P	K	G	D	K	P	H	H	Y	Q	F	K	V	W	A	L	K	T	E	K	I	P	V	D	S	N	S	S	G	A	.	.	L	V	G	Y	M	L	N
Query Conservation																																																																									.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.										.	.													.													.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.										.	.													.
Template Sequence		I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	G	T	T	F	G	N	E	I	V	S	.	.	.	.	.	.	.	Y	E	N	P	S	P	T	A	G	.	.	I	H	R	V	V	F	I	L	F	R	Q	L	.	G	R	Q	T	V	Y	A	P	G	W	R	Q	N	F	N	T	R	E	F	A	E
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	B	G	G	G	S						.	.	.	.	.	.	.							S	S	S	.	.												S	.	S	S							S	S	S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.										.	.													.
Template SS confidence
		93	.	.														.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	K	I	A	T	A	E	I	T	P	V	Y	E	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	N	L	G	L	P	V	A	A	V	F	Y	N	S	Q
Template Known Secondary structure			T	T			S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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