Job Description P02925 Confidence 93.52% Date Thu Jan 5 10:57:39 GMT 2012 Rank 105 Aligned Residues 201 % Identity 8% Template c3p3wC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:glutamate receptor 3; PDBTitle: structure of a dimeric glua3 n-terminal domain (ntd) at 4.2 a2 resolution Resolution 4.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																.	.	.									.
Query SS confidence																																.	.	.									.
Query Sequence		T	I	A	L	V	V	S	T	L	N	N	P	F	F	V	S	L	K	D	G	A	Q	K	E	A	D	K	L	G	Y	.	.	.	N	L	V	V	L	D	S	Q	.	N	N	P	A	K	E	L	A	N	V	Q	D	L	T	V	R	G	T	K	I	L	L	I	N	P	T	D	S	D	A	V	G	N	A	V	K	M	A
Query Conservation																																.	.	.									.
Alig confidence																																.	.	.									.																				.
Template Conservation																																																															.
Template Sequence		S	I	G	G	L	F	M	R	N	T	V	Q	E	H	S	A	F	R	F	A	V	Q	L	Y	N	T	N	Q	N	P	F	H	L	N	Y	H	V	D	H	L	D	S	S	N	S	F	S	V	T	N	A	F	C	S	Q	F	S	R	G	V	Y	.	A	I	F	G	F	Y	D	Q	M	S	M	N	T	L	T	S	F	C
Template Known Secondary structure									S	S																	S																S	S															T	T		S	.								T	T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	A	N	I	P	V	I	T	L	D	R	Q	A	T	K	G	E	V	V	S	H	I	A	S	D	N	V	L	G	G	K	I	A	G	D	Y	I	A	K	K	A	G	E	G	A	K	V	I	E	L	Q	G	I	A	G	T	S	A	A	R	E	R	G	E	G	F	Q	Q	A	V	A	A	H	K	F	N	V	L	A
Query Conservation
Alig confidence																													.	.																						.	.	.	.	.
Template Conservation																													.	.																						.	.	.	.	.
Template Sequence		G	A	L	H	T	S	F	V	T	P	S	F	P	T	D	A	D	V	Q	F	V	I	Q	M	R	P	A	.	.	L	K	G	A	I	L	S	L	L	S	Y	Y	K	W	E	K	F	V	Y	L	Y	.	.	.	.	.	D	T	E	R	G	F	S	V	L	Q	A	I	M	E	A	A	V	Q	N	N	W	Q	V	T	A
Template Known Secondary structure				T	T						S	S				S	S			S	S					S			.	.												T	T									.	.	.	.	.		S	S	S		S											T	T	T	T
Template Predicted Secondary structure																													.	.																						.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	P	A	D	F	D	R	I	K	G	L	N	V	M	Q	N	L	L	T	A	H	P	D	V	Q	A	V	F	A	Q	N	D	E	M	A	L	G	A	L	R	A	L	Q	T	A	G	K	S	D	V	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	V	G	N	I	K	D	V	Q	E	F	R	R	I	I	E	E	M	D	R	R	Q	E	K	R	Y	L	I	D	C	E	V	E	R	I	N	T	I	L	E	Q	V	K	H	S	R	G	Y	H	Y	M	L
Template Known Secondary structure					S	S			S	T	T										T	T	T	T																			T					T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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