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Job DescriptionP02925
Confidence98.28%DateThu Jan 5 10:57:39 GMT 2012
Rank76Aligned Residues220
% Identity10%Templatec3n0wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:abc branched chain amino acid family transporter, PDBTitle: crystal structure of a branched chain amino acid abc transporter2 periplasmic ligand-binding protein (bxe_c0949) from burkholderia3 xenovorans lb400 at 1.88 a resolution
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TIALVVST. . . LNNPFFVSLKDGAQKEADKLG. . . . . . . YNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVG
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Template Sequence  TLGVLTDXSSVYADSAGKGSVAAVQLAIEDVGGKALGQPVKLVSADYQXKTDVALSIAREWFDRDGVDAIFDVVNSGTAL
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Query Sequence  NAVKMANQANIPVITLDR. . . . . . QATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQ
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Template Sequence  AINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGYKTWFLXL. . . . PDAAYGDLXNAAIR
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   108.110.........120.........130.........140.........150.........160......... 170.........180...
 
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Query Sequence  QAVAAHKFNVLASQPADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVND
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Template Sequence  RELTAGGGQIVGSVRFPFETQDFSSYLLQAKASGAQ. LIVSTSGGAANINIXKQAREFGLPSKTQKVGGXIDILTDVKSA
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   184.....190.........200.........210......... 220.........230.........240.........250.........260..
 
   252
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Query Sequence  G
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Template Sequence  G
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   263
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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