Job Description P02925 Confidence 98.01% Date Thu Jan 5 10:57:39 GMT 2012 Rank 82 Aligned Residues 224 % Identity 13% Template c3i45A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of putative twin-arginine translocation pathway2 signal protein from rhodospirillum rubrum atcc 11170 Resolution 1.36 Å

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		28	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure													.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	A	L	V	V	S	T	L	N	N	.	P	F	F	V	S	L	K	D	G	A	Q	K	E	A	D	K	.	.	.	.	.	.	.	.	.	.	L	G	Y	N	L	V	V	L	D	S	Q	N	N	P	A	K	E	L	A	N	V	Q	D	L	T	V	R	G	T	K	I	L	L	I	N	P	T	D	S	D	A	V
Query Conservation													.																	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	G	E	I	N	S	Y	S	Q	I	P	A	F	T	L	P	Y	R	N	G	W	Q	L	A	V	E	Q	I	N	A	A	G	G	L	L	G	G	R	P	L	E	V	I	S	R	D	D	G	G	D	P	G	K	A	V	T	A	A	Q	E	L	L	T	R	H	G	V	H	A	L	A	G	T	F	L	S	H	V	G
Template Known Secondary structure									T	T	T																						T	T		B	T	T	T	B										T	T																			S							S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		G	N	A	V	K	M	A	N	Q	A	N	I	P	V	I	T	L	D	R	.	.	.	.	.	.	Q	A	T	K	G	E	V	V	S	H	I	A	S	D	N	V	L	G	G	K	I	A	G	D	Y	I	A	K	K	A	G	E	G	A	K	V	I	E	L	Q	G	I	A	G	T	S	A	A	R	E	R	G	E	G	F
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																																							.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		L	A	V	S	D	F	A	R	Q	R	K	V	L	F	M	A	S	E	P	L	T	D	A	L	T	W	E	K	G	N	R	Y	T	Y	R	L	R	P	S	T	Y	M	Q	A	A	M	L	A	A	E	A	A	K	L	P	I	T	R	W	A	T	I	A	.	.	.	.	P	N	Y	E	Y	G	Q	S	A	V	A	R	F
Template Known Secondary structure												T							S				G	G	G	T	T	T	T			T	T					S															T	T	S	S									.	.	.	.		S	S
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		Q	Q	A	V	A	A	H	K	F	N	V	L	A	S	Q	P	A	D	F	D	R	I	K	G	.	L	N	V	M	Q	N	L	L	T	A	H	P	D	V	Q	A	V	F	A	Q	N	D	E	M	A	L	G	A	L	R	A	L	Q	T	A	G	K	S	D	V	M	V	V	G	F	D	G	T	P	D	G	E	K	A	V
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		K	E	L	L	L	A	A	R	P	E	V	T	F	V	A	E	Q	W	P	A	L	Y	K	L	D	A	G	P	T	V	Q	A	L	Q	Q	A	E	P	E	G	L	F	N	V	L	F	G	A	D	L	P	K	F	V	R	E	G	R	V	R	G	L	F	A	G	R	Q	V	V	S	M	L	T	G	E	P	E	Y	L	N
Template Known Secondary structure										T	T											T	T														T			S								T	T													T	S	S	T	T										S					G
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	G	K	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	K	D	E	A
Template Known Secondary structure		G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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