Job Description P02925 Confidence 100.00% Date Thu Jan 5 10:57:39 GMT 2012 Rank 22 Aligned Residues 262 % Identity 16% Template c3cs3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from enterococcus faecalis Resolution 2.40 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	M	A	K	D	T	I	A	L	V	V	S	T	L	N	N	P	F	F	V	S	L	K	D	G	A	Q	K	E	A	D	K	L	G	Y	N	L	V	V	L	D	S	Q	N	N	P	A	K	E	L	A	N	V	Q	D	L	T	V	R	G	T	K	I	L	L	I	N	P	T	D	S	D	A	V	G	N	A	V	K
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.																			.	.
Template Conservation																																																		.	.	.	.	.	.	.																			.	.
Template Sequence		K	R	R	Q	T	N	I	I	G	V	Y	L	A	D	Y	G	G	S	F	Y	G	E	L	L	E	G	I	K	K	G	L	A	L	F	D	Y	E	M	I	V	C	S	G	K	K	S	H	L	.	.	.	.	.	.	.	F	I	P	E	K	M	V	D	G	A	I	I	L	D	W	T	F	P	.	.	T	K	E	I	E
Template Known Secondary structure															S	S		T	T	T														T	T	T								S	T	T	T	T	T	.	.	.	.	.	.	.				T	T	T		S							T	T	S		.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.																			.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	N	Q	A	N	I	P	V	I	T	L	D	R	Q	A	T	K	G	E	V	V	S	H	I	A	S	D	N	V	L	G	G	K	I	A	G	D	Y	I	A	K	K	A	G	E	G	A	K	V	I	E	L	Q	G	I	A	G	T	S	A	A	R	E	R	G	E	G	F	Q	Q	A	V	A	A	H	K	F	N	V
Query Conservation
Alig confidence																						.																											.	.
Template Conservation																						.																											.	.
Template Sequence		K	F	A	E	R	G	H	S	I	V	V	L	D	R	T	T	E	H	R	N	.	I	R	Q	V	L	L	D	N	R	G	G	A	T	Q	A	I	E	Q	F	V	N	V	G	S	K	K	.	.	V	L	L	L	S	G	P	E	K	G	Y	D	S	Q	E	R	L	A	V	S	T	R	E	L	T	R	F	G	I	P	Y
Template Known Secondary structure						T	T						S	S	S				S	T	T	.																						T	T		S		.	.								T	T	S																	T	T
Template Predicted Secondary structure																						.																											.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	Q	P	A	D	F	D	R	I	K	G	L	N	V	M	Q	N	L	L	T	A	H	P	D	V	Q	A	V	F	A	Q	N	D	E	M	A	L	G	A	L	R	A	L	Q	T	A	G	K	S	D	V	M	V	V	G	F	D	G	T	P	D	G	E	K	A	V	N	D	G	K	L	A	A	T	I	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	I	Q	G	D	F	T	E	P	S	G	Y	A	A	A	K	K	I	L	S	Q	P	Q	T	E	P	V	D	V	F	A	F	N	D	E	M	A	I	G	V	Y	K	Y	V	A	E	T	N	Y	Q	M	G	K	D	I	R	I	I	G	F	D	N	S	E	L	G	A	F	V	Q	P	R	L	A	T	I	A	Y	S
Template Known Secondary structure								S	S												T	T	S				S	S						S	S												T	T	S	S			B	T	T	T						S	S								S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	Q	I	G	A	K	G	V	E	T	A	D	K	V	L	K	G	E	K	V	Q	A	K	Y	P	V	D	L	K	L	V	V	K	Q
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		K	H	R	W	G	M	V	A	A	E	K	I	I	H	L	M	R	G	E	A	A	E	S	E	.	H	I	Y	T	R	F	I	E	G	E
Template Known Secondary structure																		T	T							.										T
Template Predicted Secondary structure																										.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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