Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6P5
Confidence99.72%DateThu Jan 5 11:03:38 GMT 2012
Rank127Aligned Residues164
% Identity27%Templated1yrba1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   203......210.........220... ......230.........240........
Predicted Secondary structure 





.....














.............................
Query SS confidence 




















. . . . .
























. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  IKLAIVGRPNVGKSTLTNRIL. . . . . GEERVVVYDMPGTTRDSIYIPMERD. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 






  
 






 
 .....     


   


 
         .............................
Alig confidence 




















.....
























.............................
Template Conservation   

 


  







  
            

 
                                            
Template Sequence  MIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMREGYGPNGAIVESYDRLMEK
Template Known Secondary structure 

STTSSTTTS


SS
S

SS

SGGGT

TTT

TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   249250.........260.........270.........280.........290.........300.........310
Predicted Secondary structure  .............



















.....
Query SS confidence  . . . . . . . . . . . . .





























































. . . . .
Query Sequence  . . . . . . . . . . . . . GREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFIL. . . . .
Query Conservation  .............     
 

 
                 
    
  


 





       
  
   
 .....
Alig confidence  .............






















......
































.....
Template Conservation                         
            ......           
 
                        
Template Sequence  FNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGV. . . . . . RLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDL
Template Known Secondary structure 
S

SSS......TSSS

GGG

S
Template Predicted Secondary structure 











......










Template SS confidence 















































































   81........90.........100.........110...... ...120.........130.........140.........150....
 
   311........320.........330.........340..... ....350.........360.....
Predicted Secondary structure 












.........................









Query SS confidence 


































. . . . . . . . . . . . . . . . . . . . . . . . .



















Query Sequence  NSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFI. . . . . . . . . . . . . . . . . . . . . . . . . DFARVHFISALHGSGVGNLF
Query Conservation     

 


 

 

            
   
   .........................   


 


  
 

  
 
Alig confidence 


































.........................



















Template Conservation        
 
 

 
                                                  

 


  
 

  
 
Template Sequence  RLGATTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLE
Template Known Secondary structure  TS


GGG




SS






TTT
TT
Template Predicted Secondary structure 





















Template SS confidence 















































































   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   366...370..
Predicted Secondary structure 
Query SS confidence 






Query Sequence  ESVREAY
Query Conservation    
    
Alig confidence 






Template Conservation    
 
  
Template Sequence  TLAYEHY
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   235....240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions