Job Description P0A6P5 Confidence 99.40% Date Thu Jan 5 11:03:38 GMT 2012 Rank 249 Aligned Residues 153 % Identity 16% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		S	L	P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T	L	T	N	R	I	L	G	E	E	R	V	V	V	Y	D	M	P	G	T	T	R	D	S	I	Y	I	P	M	E	R	D	G	R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	.	.	.	.	.	.	.	K	I	T	D	A	V	E	K
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																							.											.	.	.	.	.	.	.								.
Template Conservation																													.	.	.	.	.																							.																									.
Template Sequence		Q	N	E	P	R	F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	S	S	.	.	.	.	.	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	.	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	P	Q	I	Q	K	V	C	.
Template Known Secondary structure												G	G	G	T	S	S	S	S								T		.	.	.	.	.		S	S							G	G	G			T	T	S						.			S	S	S	S									S										.
Template Predicted Secondary structure																													.	.	.	.	.																							.																									.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.							.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																											.	.																	.	.	.	.	.	.									.
Query SS confidence																											.	.																	.	.	.	.	.	.									.
Query Sequence		F	S	V	I	K	T	L	Q	A	I	E	D	A	N	V	V	M	L	V	I	D	A	R	E	G	.	.	I	S	D	Q	D	L	S	L	L	G	F	I	L	N	S	G	.	.	.	.	.	.	R	S	L	V	I	V	V	N	.	K	W	D	G	L	S	Q	E	V	K	E	Q	V	K	E	T	L	D	F	R	L	G
Query Conservation																											.	.																	.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.																	.	.	.	.	.	.									.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	X	P	C	F	Y	L	A	H	E	L	H	L	N	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.				S									B	T	T																S		T	T	S	S		S		S									S	S	T	T	S		B										T	T	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	D	F	A	R	V	H	F	I	S	A	L	H	G	S	G	V	G	N	L	F	E	S	V	R	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	N	H	P	W	L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E
Template Known Secondary structure		.		S									T	T	T		T	T									T	T
Template Predicted Secondary structure		.
Template SS confidence
			354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions