Job Description P0A6P5 Confidence 99.56% Date Thu Jan 5 11:03:38 GMT 2012 Rank 191 Aligned Residues 208 % Identity 18% Template c3dpuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco) Resolution 2.90 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	D	E	D	A	E	Y	W	A	Q	F	E	A	E	E	N	G	E	E	E	E	E	D	D	F	D	P	Q	S	L	P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T	L	T	N	R	I	L	G	E	E	R	V	V	V	Y	D	M	P	G	T	T	R	D	S	I	Y	I	P	M	E	R	D	G
Query Conservation
Alig confidence																																																																											.	.
Template Conservation																																																																											.	.
Template Sequence		P	E	I	V	K	Q	G	K	E	A	V	R	Q	Y	F	Q	S	I	E	E	A	R	S	K	G	E	A	L	V	H	L	Q	E	I	K	V	H	L	I	G	D	G	M	A	G	K	T	S	L	L	K	Q	L	I	G	G	L	N	V	V	T	K	Q	A	P	N	I	K	G	L	E	N	D	.	.	D	E	L	K	E
Template Known Secondary structure				T	T		S	S																	T	T				B											S	S	S		S	S																			G	G	G	S	G	G	G	T	T		.	.	S	T	T	T	T
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.			.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	K	I	T	D	A	V	E	K	F	S	V	I	K	T	L	Q	A	I	E	D	A	N	V	V	M	L	V	I	D	A	R	E	G	I	S	D	Q	D	L	S	L	L	G	F	I	L	N	S	.	.	G	R	S	L	V	I	V	V	N	K	W	D	G	L	S
Query Conservation																																																																	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.															.	.															.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		C	L	F	H	F	W	D	F	G	G	Q	E	I	M	H	A	S	H	Q	F	F	M	.	.	.	.	.	.	.	.	.	.	.	T	R	S	S	V	Y	M	L	L	L	D	S	R	T	.	.	D	S	N	K	H	Y	W	L	R	H	I	E	K	Y	G	G	K	S	P	V	I	V	V	M	N	K	I	D	E	N	P
Template Known Secondary structure											S			T	T	T	T	T						.	.	.	.	.	.	.	.	.	.	.		S	S									G	G	G	.	.	G	G	G												S	S	S										T	T	T		T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530												.	.	.	.	.	.	.	.	.	540	.	.	.	.			.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		Q	E	V	K	E	Q	V	K	E	T	L	D	F	R	L	G	F	I	D	F	A	R	V	H	F	I	S	A	L	H	G	S	G	V	G	N	L	F	E	S	V	R	E	A	Y	D	S	S	T	R	R	V	G	T	S	.	.	M	L	T	R	I	M	T	M	A	V	E	D	H	Q
Query Conservation																																																									.	.
Alig confidence				.	.																.												.																								.	.
Template Conservation				.	.																.												.
Template Sequence		S	Y	.	.	N	I	E	Q	K	K	I	N	E	R	F	P	A	I	E	.	N	R	F	H	R	I	S	C	V	E	S	.	I	A	K	S	L	K	S	A	V	L	H	P	D	S	I	Y	G	T	P	L	A	P	S	W	I	K	V	K	E	K	L	V	E	A	T	T	A	Q	R
Template Known Secondary structure		T		.	.												G	G	G	T	.	T									T	T	.										T		T	T	S	G	G	G			B																		S	S
Template Predicted Secondary structure				.	.																.												.
Template SS confidence
		576	.			.	.	580	.	.	.	.	.	.	.	.	.	590	.	.		.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions