Job Description P0A6P5 Confidence 99.88% Date Thu Jan 5 11:03:38 GMT 2012 Rank 45 Aligned Residues 210 % Identity 19% Template c2wwwB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:methylmalonic aciduria type a protein, PDBTitle: crystal structure of methylmalonic acidemia type a protein Resolution 2.64 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																											.	.
Query SS confidence																		.	.	.	.																											.	.
Query Sequence		A	A	S	H	G	R	G	V	L	S	L	L	E	H	V	L	.	.	.	.	L	P	W	M	E	D	L	A	P	Q	E	E	V	D	E	D	A	E	Y	W	A	Q	F	E	A	E	.	.	E	N	G	E	E	E	E	E	D	D	F	D	P	Q	S	L	P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T
Query Conservation																		.	.	.	.																											.	.
Alig confidence																		.	.	.	.																											.	.
Template Conservation
Template Sequence		S	D	K	E	Q	R	F	V	D	K	L	Y	T	G	L	I	Q	G	Q	R	A	C	L	A	E	A	I	T	L	V	E	S	T	H	S	R	K	K	E	L	A	Q	V	L	L	Q	K	V	L	L	Y	H	R	E	Q	E	Q	S	N	K	G	K	P	L	A	F	R	V	G	L	S	G	P	P	G	A	G	K	S	T
Template Known Secondary structure																		T	T																S																								T	T	T	T			S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.													.	.
Query SS confidence												.	.	.	.	.	.													.	.
Query Sequence		L	T	N	R	I	L	G	E	E	R	.	.	.	.	.	.	V	V	V	Y	D	M	P	G	T	T	R	D	.	.	S	I	Y	I	P	M	E	R	D	G	R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	K	I	T	D	A	V	E	K	F	S	V	I	K	T	L	Q	A	I	E	D	A	N	V	V	M
Query Conservation												.	.	.	.	.	.													.	.
Alig confidence												.	.	.	.	.	.													.	.																															.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		F	I	E	Y	F	G	K	M	L	T	E	R	G	H	K	L	S	V	L	A	V	D	T	E	L	S	R	D	M	N	A	Y	I	R	P	T	R	T	T	N	E	A	I	L	L	C	E	G	A	G	Y	D	I	I	L	I	E	T	V	G	.	.	.	.	.	.	Q	S	E	F	A	V	A	D	M	V	D	M	F	V
Template Known Secondary structure													T	T												S	S	S		T	T							T	T											T	T		S									.	.	.	.	.	.								T	T	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		L	V	I	D	A	R	E	G	I	S	D	Q	D	L	S	L	L	G	F	I	L	N	S	G	R	S	L	V	I	V	V	N	K	W	D	G	L	S	Q	E	V	K	E	Q	V	K	E	T	L	D	F	R	L	G	F	I	D	F	A	.	.	.	.	.	.	R	V	H	F	I	S	A	L	H	G	S	G	V	G	N
Query Conservation																																																													.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	L	P	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	M	A	D	L	V	A	V	T	K	S	D	G	D	L	I	V	P	A	R	R	I	Q	A	E	Y	V	S	A	L	K	L	L	R	K	R	S	Q	V	W	K	P	K	V	I	R	I	S	A	R	S	G	E	G	I	S	E
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S								S	T	T	S	S															T	T	S			S		S	S										T	T	T		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.																	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	E	S	V	R	E	A	Y	D	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	W	D	K	M	K	D	F	Q	D	L	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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