Job Description P0A6P5 Confidence 94.80% Date Thu Jan 5 11:03:38 GMT 2012 Rank 480 Aligned Residues 105 % Identity 17% Template c2ph1A_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:nucleotide-binding protein; PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165 Resolution 2.70 Å

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		4	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.															.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure							.																.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	A	L	V	.	G	R	P	N	V	G	K	S	T	L	F	N	R	L	T	.	.	.	.	.	.	R	T	R	D	A	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	P	G	L	T	R	D	R	K	Y	G	R	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation							.																.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	V	X	S	G	K	G	G	V	G	K	S	T	V	T	A	L	L	A	V	H	Y	A	R	Q	G	K	K	V	G	I	L	D	A	D	F	L	G	P	S	I	P	I	L	F	G	L	R	N	A	R	I	A	V	S	A	E	G	L	E	P	V	L	T	Q	K	Y	G	I	K	V	X	S	X	Q	F	L	L
Template Known Secondary structure								S	S	S		T	T															T	T										S	S								T	T			S							T	T								T	T	T							G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
																												47	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	G	R	E	F	I	C	I	D	T	.	G	G	I	D	G	T	E	D	G	V	E	T	R	M	A	E	Q	S	L	L	A	I	E	E	A	D	V	V	L	F	M	V	D	A	R	A	G	L	M	P	A	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.						.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		P	K	E	N	T	P	V	I	W	R	G	P	L	I	A	G	X	I	R	E	F	L	G	R	V	A	W	G	E	L	D	H	L	L	I	D	L	P	P	G	T	G	D	.	.	.	.	.	.	.	.	.	A	P	L	T	V	X	Q	D	A	K	P	T	G	V	V	V	V	S	T	P	Q	E	L	T	A	V	I	V
Template Known Secondary structure		T	T		S	S						S													S	B				S		S								S	S	S	S	S	.	.	.	.	.	.	.	.	.												S								S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	I	A	K	H	L	R	S	R	E	K	P	T	F	L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	A	I	N	X	A	E	E	T	N	T	S	V	L	G	L	V
Template Known Secondary structure										T	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions