Job Description P0A6P5 Confidence 99.45% Date Thu Jan 5 11:03:38 GMT 2012 Rank 236 Aligned Residues 156 % Identity 21% Template c2p5sB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras and ef-hand domain containing; PDBTitle: rab domain of human rasef in complex with gdp Resolution 2.15 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T	L	T	N	R	I	L	G	E	E	R	V	V	V	Y	D	M	P	G	T	T	R	D	S	I	Y	I	P	M	E	R	D	G	R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	K	I	T	D	A	V	E	K	F	S	V	I	K	T	L	Q	A
Query Conservation
Alig confidence																											.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	K	I	V	L	A	G	D	A	A	V	G	K	S	S	F	L	M	R	L	C	K	N	E	.	.	.	.	.	.	F	R	G	V	D	F	Q	M	K	T	L	I	V	D	G	E	R	T	V	L	Q	L	W	D	T	A	G	Q	E	R	F	R	S	I	A	K	S	Y	F	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	T	T	S	S											S		.	.	.	.	.	.														T	T											T	T		T	T										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.							.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																									.																												.	.	.
Query SS confidence																									.																												.	.	.
Query Sequence		I	E	D	A	N	V	V	M	L	V	I	D	A	R	E	G	I	S	D	Q	D	L	S	.	L	L	G	F	I	L	N	S	G	R	S	L	V	I	V	V	N	K	W	D	G	L	S	Q	E	V	K	.	.	.	E	Q	V	K	E	T	L	D	F	R	L	G	F	I	D	F	A	R	V	H	F	I	S	A	L	H
Query Conservation																									.																												.	.	.
Alig confidence		.																							.																												.	.	.
Template Conservation		.
Template Sequence		.	R	K	A	D	G	V	L	L	L	Y	D	V	T	C	E	K	S	F	L	N	I	R	E	W	V	D	M	I	E	D	A	A	V	P	I	M	L	V	G	N	K	A	D	I	R	D	T	A	A	T	E	G	Q	K	C	V	P	G	H	F	G	E	K	L	A	M	T	Y	G	A	L	F	C	E	T	S	A	K	D
Template Known Secondary structure		.				S								T	T							T																						G	G	G							T	T																	T								T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	G	V	G	N	L	F	E	S	V	R	E	A	Y	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	N	I	V	E	A	V	L	H	L	A	R	E	V	K	K
Template Known Secondary structure			T	T														T
Template Predicted Secondary structure
Template SS confidence
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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