Job Description P0A6P5 Confidence 98.06% Date Thu Jan 5 11:03:38 GMT 2012 Rank 302 Aligned Residues 204 % Identity 19% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	A	L	V	G	R	P	N	V	G	K	S	T	L	F	N	R	L	T	R	T	R	D	A	L	V	A	D	F	P	G	L	T	R	D	R	K	Y	G	R	A	E	I	E	G	R	E	F	I	C	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Y	G	I	C	G	P	N	G	C	G	K	S	T	L	X	R	A	I	A	N	G	Q	V	D	G	F	P	T	Q	E	E	C	R	T	V	Y	V	E	H	D	I	D	G	T	H	S	D	T	S	V	L	D	F	V	F	E	S	G	V	G	T	K	E	A	I	K	D	K	L	I	E	F	G	F	T	D	E	X	I
Template Known Secondary structure								S	T	T	S	S										T	T		S	T	T				T	T	T	S					T	T								T	T	S	B							T	T			S													T
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
									57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	G	G	I	D	G	T	E	D	G	V	E	T	R	M	A	E	Q	S	L	L	A	I	E	E	A	D	V	V	L	F	M	V	D	A	R	A	G	L	M	P	A	D	E	A	I	A	K	H	L	R	S	R	E	K	P	T	F	L	V	A	N	K	T	D	G	L	D	P	D	Q	A	V
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.				.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template Sequence		A	X	P	I	S	A	L	S	G	G	.	.	.	.	.	.	.	.	W	K	X	K	L	A	L	A	R	A	V	L	R	N	A	D	I	L	L	L	D	E	P	T	N	H	L	D	T	V	N	V	A	W	L	V	N	Y	L	N	T	C	G	I	T	S	I	T	I	S	H	D	S	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	B	G	G	G					.	.	.	.	.	.	.	.													T	T		S						S	T	T	T	T																S		S							S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.									.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		V	D	F	Y	S	L	G	L	G	E	I	Y	P	I	A	A	S	H	G	R	G	V	L	S	L	L	E	H	V	L	L	P	W	M	E	D	L	A	P	Q	E	E	V	D	E	D	A	E	Y	W	A	Q	F	E	A	E	E	N	G	E	E	E	E	E	D	D	F	D	P	Q	S	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence		.																																																																							.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	V	F	L	D	N	V	C	E	Y	I	I	N	Y	E	G	L	K	L	R	K	Y	K	G	N	F	T	E	F	V	K	K	C	P	A	A	K	A	Y	E	E	L	S	N	T	D	L	E	F	K	F	P	E	P	G	Y	L	E	G	V	K	T	K	Q	K	A	I	V	K	V	T	N	X	E	F	Q	Y	P	G	T
Template Known Secondary structure		.								S							T	T							S										G	G	G	G	G	T	T		S	S	G	G	G	G											T	T			S	T	T	S		S											T	T
Template Predicted Secondary structure		.
Template SS confidence
			600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
															201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T	L	T	N	R	I	L	G	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	P	Q	I	T	D	I	N	F	Q	C	S	L	S	S	R	I	A	V	I	G	P	N	G	A	G	K	S	T	L	I	N	V	L	T	G	E
Template Known Secondary structure		S	S		S										T	T							S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions