Job Description P0A6P5 Confidence 99.62% Date Thu Jan 5 11:03:38 GMT 2012 Rank 174 Aligned Residues 97 % Identity 25% Template c2gedB_ PDB info PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	A	L	V	G	R	P	N	V	G	K	S	T	L	F	N	R	L	T	R	T	R	D	A	L	V	A	D	F	P	G	L	T	R	D	R	K	Y	G	R	A	E	I	E	G	R	E	F	I	C	I	D	T	G	G	I	D	G	T	E	D	G	V	E	T	R	M	A	E	Q	S	L	L	A	I	E	E	A
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		P	S	I	I	I	A	G	P	Q	N	S	G	K	T	S	L	L	T	L	L	T	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	G	S	G	V	T	L	V	D	F	P	G	.	.	.	.	H	V	K	L	R	Y	K	L	S	D	Y	L	K	T	R	A	K	F	V
Template Known Secondary structure										T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T		S				T	T	T	.	.	.	.					S											G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																						.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure														.	.	.													.	.	.	.	.	.
Query SS confidence														.	.	.													.	.	.	.	.	.
Query Sequence		D	V	V	L	F	M	V	D	A	R	A	G	.	.	.	L	M	P	A	D	E	A	I	A	K	H	L	.	.	.	.	.	.	R	S	R	E	K	P	T	F	L	V	A	N	K	T	D	G	L	D
Query Conservation														.	.	.													.	.	.	.	.	.
Alig confidence														.	.	.													.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	L	I	F	M	V	D	S	T	V	D	P	K	K	L	T	T	T	A	E	F	L	V	D	I	L	S	I	T	E	S	S	C	E	N	G	I	D	I	L	I	A	C	N	K	S	E	L	F	T
Template Known Secondary structure										S	S																								S	T	T											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions