Job Description P0A6P5 Confidence 99.89% Date Thu Jan 5 11:03:38 GMT 2012 Rank 43 Aligned Residues 153 % Identity 20% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T	L	T	N	R	I	L	G	E	E	R	V	V	V	Y	D	M	P	G	T	T	R	D	S	I	Y	I	P	M	E	R	D	G	R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	K	I	T	D	A	V	E	K	F	S	V	I	K	T	L	Q
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	X	A	N	V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	G	.	.	.	.	.	.	.	.	.	K	K	G	T	S	S	D	I	T	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	Y	P	K	T	L	K	S	.	.	.	.	.	.	.	.	.	.	.	L	I	T
Template Known Secondary structure											S	T	T	S	S							T	T	S	.	.	.	.	.	.	.	.	.						S	S	S							S	S	S	S								T	T	T	T	T					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																													.	.
Query SS confidence																																					.																													.	.
Query Sequence		A	I	E	D	A	N	V	V	M	L	V	I	D	A	R	E	G	I	S	D	Q	D	L	S	L	L	G	F	I	L	N	S	G	R	S	.	L	V	I	V	V	N	K	W	D	G	L	S	Q	E	V	K	E	Q	V	K	E	T	L	D	F	R	L	G	.	.	F	I	D	F	A	R	V	H	F	I	S	A	L	H
Query Conservation																																					.																													.	.
Alig confidence																.																					.																													.	.
Template Conservation																.
Template Sequence		A	L	N	I	S	D	I	A	V	L	C	I	P	P	.	Q	G	L	D	A	H	T	G	E	C	I	I	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	H	X	H	A	I	D	E	L	K	A	K	L	K	V	I	T	S	G	T	V	L	Q	D	W	E	C	I	S	L	N	T	N	K
Template Known Secondary structure					T		S								T	.	T																T	T											G	G	G	S																T	T	T	S	T	T	T	T										T
Template Predicted Secondary structure																.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		358						.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		G	.	.	.	.	.	S	G	V	G	N	L	F	E	S	V	R	E	A	Y	D	S
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		S	A	K	N	P	F	E	G	V	D	E	L	K	A	R	I	N	E	V	A	E	K
Template Known Secondary structure		T	S	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions