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Job DescriptionP0A6P5
Confidence98.79%DateThu Jan 5 11:03:38 GMT 2012
Rank277Aligned Residues148
% Identity19%Templatec1zu4A_
PDB info PDB header:protein transportChain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20... ......30.... .....40.......
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Query Sequence  PVVALVGRPNVGKSTLFNRLT. . . . . . RTRDALVADFP. . . . . . . . . . . . GLTRDRKYGRAEI. . . . . . . . . . . . . . . . .
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Template Sequence  NIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDLVKANKLNADPASVVFDAIK
Template Known Secondary structure  SSTTSSTT




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   197..200.........210.........220.........230.........240.........250.........260.........270......
 
   48.50.........60.........70......... 80.........90.........100.........110.........
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Query Sequence  . . . . EGREFICIDTGGIDGTEDGVETRMAEQSLLAI. . . . EEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK
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Template Sequence  KAKEQNYDLLLIDTAGRLQNKTNLMAELEKMNKIIQQVEKSAPHEVLLVIDATTG. . QNGVIQAEEFSKVADVSGIILTK
Template Known Secondary structure  TT
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GGGTT
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SGGGT..TTTS



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   277..280.........290.........300.........310.........320.........330. ........340.........350....
 
   120.........130.........140.........150....
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Query Sequence  TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSL
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Template Sequence  MDSTSKGGIGLAIKELLNIPIKMIG. . VGEKVDDL
Template Known Secondary structure  GGG
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   355....360.........370......... 380.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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