Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6P5
Confidence99.49%DateThu Jan 5 11:03:38 GMT 2012
Rank222Aligned Residues166
% Identity17%Templatec1zbdA_
PDB info PDB header:g proteinChain: A: PDB Molecule:rabphilin-3a; PDBTitle: structural basis of rab effector specificity: crystal2 structure of the small g protein rab3a complexed with the3 effector domain of rabphilin-3a
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTL
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Template Sequence  DYXFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLERYR. . . . . . . . . . TITT
Template Known Secondary structure  S
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Query Sequence  QAIEDANVVMLVIDAREGISDQDLSLLGFILNS. . . . GRSLVIVVNKWDGLSQE. VKEQVKETLDFRLGFIDFARVHFIS
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Template Sequence  AYYRGAXGFILXYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDXEDERVVSSERGRQLADHL. . . . GFEFFEAS
Template Known Secondary structure  TTGGG
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   90.........100.........110.........120.........130.........140.........150....... ..160.....
 
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Query Sequence  ALHGSGVGNLFESVRE. AYDSSTRRV
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Template Sequence  AKDNINVKQTFERLVDVICEKXSESL
Template Known Secondary structure  TTTTBSST
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   166...170.........180.........190.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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