Job Description P0A6P5 Confidence 99.49% Date Thu Jan 5 11:03:38 GMT 2012 Rank 222 Aligned Residues 166 % Identity 17% Template c1zbdA_ PDB info PDB header:g protein Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: structural basis of rab effector specificity: crystal2 structure of the small g protein rab3a complexed with the3 effector domain of rabphilin-3a Resolution 2.60 Å

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		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T	L	T	N	R	I	L	G	E	E	R	V	V	V	Y	D	M	P	G	T	T	R	D	S	I	Y	I	P	M	E	R	D	G	R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	K	I	T	D	A	V	E	K	F	S	V	I	K	T	L
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	X	F	K	I	L	I	I	G	N	S	S	V	G	K	T	S	F	L	F	R	Y	A	D	D	S	F	T	P	A	F	V	S	T	V	G	I	D	F	K	V	K	T	I	Y	R	N	D	K	R	I	K	L	Q	I	W	D	T	A	G	L	E	R	Y	R	.	.	.	.	.	.	.	.	.	.	T	I	T	T
Template Known Secondary structure		S										S	T	T	S	S										T					S							S											T	T													S	G	G	G		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.											.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																		.
Query SS confidence																																			.	.	.	.																		.
Query Sequence		Q	A	I	E	D	A	N	V	V	M	L	V	I	D	A	R	E	G	I	S	D	Q	D	L	S	L	L	G	F	I	L	N	S	.	.	.	.	G	R	S	L	V	I	V	V	N	K	W	D	G	L	S	Q	E	.	V	K	E	Q	V	K	E	T	L	D	F	R	L	G	F	I	D	F	A	R	V	H	F	I	S
Query Conservation																																			.	.	.	.																		.
Alig confidence																																			.	.	.	.																		.														.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		A	Y	Y	R	G	A	X	G	F	I	L	X	Y	D	I	T	N	E	E	S	F	N	A	V	Q	D	W	S	T	Q	I	K	T	Y	S	W	D	N	A	Q	V	L	L	V	G	N	K	C	D	X	E	D	E	R	V	V	S	S	E	R	G	R	Q	L	A	D	H	L	.	.	.	.	G	F	E	F	F	E	A	S
Template Known Secondary structure		T	T	G	G	G		S								T	T																			S		S	S										T	T		T	T	S			S													.	.	.	.	T							B
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		A	L	H	G	S	G	V	G	N	L	F	E	S	V	R	E	.	A	Y	D	S	S	T	R	R	V
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		A	K	D	N	I	N	V	K	Q	T	F	E	R	L	V	D	V	I	C	E	K	X	S	E	S	L
Template Known Secondary structure		T	T	T	T	B	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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