Job Description P0A6P5 Confidence 100.00% Date Thu Jan 5 11:03:38 GMT 2012 Rank 5 Aligned Residues 159 % Identity 37% Template c1xzqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		V	V	A	L	V	G	R	P	N	V	G	K	S	T	L	F	N	R	L	T	R	T	R	D	A	L	V	A	D	F	P	G	L	T	R	D	R	K	Y	G	R	A	E	I	E	G	R	E	F	I	C	I	D	T	G	G	I	.	D	G	T	E	D	G	V	E	T	R	M	A	E	Q	S	L	L	A	I	E	E	A
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		R	M	V	I	V	G	K	P	N	V	G	K	S	T	L	L	N	R	L	L	N	E	D	R	A	I	V	T	D	I	P	G	T	T	R	D	V	I	S	E	E	I	V	I	R	G	I	L	F	R	I	V	D	T	A	G	V	R	S	E	T	N	D	L	V	E	R	L	G	I	E	R	T	L	Q	E	I	E	K	A
Template Known Secondary structure									T	T	G	G	G	S										T	B										S			S								T	T								S	S				S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		D	V	V	L	F	M	V	D	A	R	A	G	L	M	P	A	D	E	A	I	A	K	H	L	R	S	R	E	K	P	T	F	L	V	A	N	K	T	D	G	L	D	P	D	Q	A	V	V	D	F	Y	S	L	G	L	G	.	E	I	Y	P	I	A	A	S	H	G	R	G	V	L	S	L	L	E	H	V	L	L	P
Query Conservation																																																										.
Alig confidence																										.	.																															.
Template Conservation																										.	.
Template Sequence		D	I	V	L	F	V	L	D	A	S	S	P	L	D	E	E	D	R	K	I	L	E	R	I	.	.	K	N	K	R	Y	L	V	V	I	N	K	V	D	V	V	E	K	I	N	E	E	E	I	K	N	K	L	G	T	D	R	H	M	V	K	I	S	A	L	K	G	E	G	L	E	K	L	E	E	S	I	Y	R	E
Template Known Secondary structure		S								S	S	S													G	.	.	G	G	S	S									S	S				S									T	S		S	T	T						T	T	T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		162	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		371	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions