Job Description P0A6P5 Confidence 99.97% Date Thu Jan 5 11:03:38 GMT 2012 Rank 11 Aligned Residues 173 % Identity 25% Template c1udxA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:the gtp-binding protein obg; PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8 Resolution 2.07 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		M	V	P	V	V	A	L	V	G	R	P	N	V	G	K	S	T	L	F	N	R	L	T	R	T	R	D	A	L	V	A	D	F	P	G	L	T	R	D	R	K	Y	G	R	A	E	I	.	E	G	R	E	F	I	C	I	D	T	G	G	I	D	G	T	E	D	G	V	E	T	R	M	A	E	Q	S	L	L	A	I
Query Conservation																																																	.
Alig confidence																													.																				.																	.
Template Conservation																													.																																					.
Template Sequence		L	I	A	D	V	G	L	V	G	Y	P	N	A	G	K	S	S	L	L	A	A	M	T	R	A	H	P	.	K	I	A	P	Y	P	F	T	T	L	S	P	N	L	G	V	V	E	V	S	E	E	E	R	F	T	L	A	D	I	P	G	I	I	E	G	.	A	S	E	G	K	G	L	G	L	E	F	L	R	H	I
Template Known Secondary structure			S		S							G	G	G											S	S			.						T	T		S	S										S	S	S															.	G	G	G	S			S
Template Predicted Secondary structure																													.																																					.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																	.	.	.	.	.																	.	.
Query SS confidence																																	.	.	.	.	.																	.	.
Query Sequence		E	E	A	D	V	V	L	F	M	V	D	A	R	A	G	L	M	P	A	D	E	A	I	A	K	H	L	R	S	R	E	.	.	.	.	.	K	P	T	F	L	V	A	N	K	T	D	G	L	D	P	D	.	.	Q	A	V	V	D	F	Y	S	L	G	L	G	E	I	Y	P	I	A	A	S	H	G	R	G	V	L
Query Conservation																																	.	.	.	.	.																	.	.
Alig confidence																																	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		A	R	T	R	V	L	L	Y	V	L	D	A	A	D	E	P	L	K	T	L	E	T	L	R	K	E	V	G	A	Y	D	P	A	L	L	R	R	P	S	L	V	A	L	N	K	V	D	L	L	E	E	E	A	V	K	A	L	A	D	A	L	A	R	E	G	L	A	V	L	P	V	S	A	L	T	G	A	G	L	P
Template Known Secondary structure		T	S	S	S								T	T	S																							S										T	T	S														T	T	T	S							T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	E	H	V	L	L	P	W	M	E	D	L	A	P	Q	E	E	V	D	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	K	E	A	L	H	A	L	V	R	S	T	P	P	P	E	M	P	K	P	V	P
Template Known Secondary structure													T	S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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