Job Description P0A6P5 Confidence 98.54% Date Thu Jan 5 11:03:38 GMT 2012 Rank 290 Aligned Residues 132 % Identity 20% Template c1tndA_ PDB info PDB header:binding protein(gtp) Chain: A: PDB Molecule:transducin; PDBTitle: the 2.2 angstroms crystal structure of transducin-alpha complexed with2 gtp gamma s Resolution 2.20 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.												.	.	.	300	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	R	D	S	I	Y	I	P	M	E	R	D	G	R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	K	I	T	D	A	V	E	K	F	S	V	I	K	T	L	Q	A	I	E	D	A	N	V	V	M	L	V	I	D	A	R	E	.	.	.	.	.	.	.	.	.	.	.	G	I	S	D	Q	D	L	S
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	T	G	I	I	E	T	Q	F	S	F	K	D	L	N	F	R	M	F	D	V	G	G	Q	R	S	E	R	K	K	W	I	H	C	F	.	.	.	.	.	.	.	.	.	.	.	E	G	V	T	C	I	I	F	I	A	A	L	S	A	Y	D	M	V	L	V	E	D	D	E	V	N	R	M	H	E	S	L	H
Template Known Secondary structure					S									T	T											S					G	G	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	T	T		S								G	G	G	G	G		B		S	S		T	T	S	B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.												.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		305	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.																		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.							.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence										.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		L	L	G	F	I	L	N	S	.	.	.	.	G	R	S	L	V	I	V	V	N	K	W	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	Q	E	V	K	E	Q	V	K	E	T	L	D	F	R	L	G	F	I	D	.	.	.	.	.	.	F	A	R	V	H	F	I	S	A	L	H
Query Conservation										.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence										.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	N	S	I	C	N	H	R	Y	F	A	T	T	S	I	V	L	F	L	N	K	K	D	V	F	S	E	K	I	K	K	A	H	L	S	I	C	F	P	D	Y	N	G	P	N	T	Y	E	D	A	G	N	Y	I	K	V	Q	F	L	E	L	N	M	R	R	D	V	K	E	I	Y	S	H	M	T	C	A	T	D
Template Known Secondary structure								T		S	G	G	G	S																		T	T	S		G	G	G	T		T	T			S																	T	T		T	T	B	T	T	B									T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	G	V	G	N	L	F	E	S	V	R	E	A	Y	D	S	S	T	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	N	V	K	F	V	F	D	A	V	T	D	I	I	I	K	E	N	L	K
Template Known Secondary structure																			S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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