Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6P5
Confidence99.63%DateThu Jan 5 11:03:38 GMT 2012
Rank166Aligned Residues125
% Identity19%Templatec1t9hA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable gtpase engc; PDBTitle: the crystal structure of yloq, a circularly permuted gtpase.
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90... ......100. ........110.........120....... ..130.........140.........150.
Predicted Secondary structure 





.


.









.......









Query SS confidence 












.







.

























. . . . . . .























Query Sequence  EADVVLFMVDARA. GLMPADEA. IAKHLRSREKPTFLVANKTDGLDPDQ. . . . . . . AVVDFYSLGLGEIYPIAASHGRGV
Query Conservation   

 

 


   .     
  .    
       


 



      .......   
   

      


  
 
 
Alig confidence 












.







.

























.......









.












Template Conservation 


 






  
      


 
  
   

  





 

         
          
 . 

 


    

Template Sequence  NVDQAVLVFSAVQPSFSTALLDRFLVLVEANDIQPIICITKMDLIEDQDTEDTIQAYAEDYRNIGY. DVYLTSSKDQDSL
Template Known Secondary structure 


STTTT

TTT

GGG


T
.


TT
Template Predicted Secondary structure 






















.






Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.. .......150.....
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LSLLEHVLLPWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVY
Query Conservation    

  
   
 
                                      






  
 






 
      


Alig confidence 










..........................................

















.........
Template Conservation    
   
  
 ..........................................    
 









 
.........
Template Sequence  ADIIPHFQDKT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TVFAGQSGVGKSSLLNAI. . . . . . . . .
Template Known Secondary structure  TTTGGGGTTS..........................................S.........
Template Predicted Secondary structure 


..........................................





.........
Template SS confidence 















































































   156...160...... ...170.........180....
 
   232.......240.........250.........260....
Predicted Secondary structure 















Query SS confidence 
































Query Sequence  DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRG
Query Conservation     


 
              
 

 
     
Alig confidence  ...











....













Template Conservation  ...  
         ....
  





     
Template Sequence  . . . SPTRHVELIHTS. . . . GGLVADTPGFSSLE
Template Known Secondary structure  ...






T....TSS
S
SS

Template Predicted Secondary structure  ...





....






Template SS confidence 
































   185....190...... ...200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions