Job Description P0A6P5 Confidence 99.81% Date Thu Jan 5 11:03:38 GMT 2012 Rank 96 Aligned Residues 142 % Identity 28% Template c1r5nA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp- PDBTitle: crystal structure analysis of sup35 complexed with gdp Resolution 2.90 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		P	Q	S	L	P	I	K	L	A	I	V	G	R	P	N	V	G	K	S	T	L	T	N	R	I	L	G	E	E	R	V	V	V	Y	D	M	P	.	G	T	T	R	D	S	I	Y	I	P	M	E	R	D	G	R	E	Y	V	L	I	D	T	A	G	V	R	K	R	G	K	I	T	D	A	V	E	K	F	S	V	I
Query Conservation																																							.
Alig confidence																																							.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	K	E	H	V	N	I	V	F	I	G	H	V	D	A	G	K	S	T	L	G	G	N	I	L	F	L	T	G	M	V	D	K	R	T	M	E	K	I	E	R	E	A	K	R	A	Y	F	E	T	E	H	R	R	F	S	L	L	D	A	P	G	A	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S													T	T	S	S												T	T	S	S																				S	S											T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																			.												.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.																			.												.	.	.	.
Query Sequence		K	T	L	Q	A	I	E	D	A	N	V	V	M	L	V	I	D	A	R	E	G	.	.	.	.	.	.	.	I	S	D	Q	D	L	S	L	L	G	F	I	L	N	S	G	R	S	.	L	V	I	V	V	N	K	W	D	G	L	.	.	.	.	S	Q	E	V	K	E	Q	V	K	E	T	L	D	F	R	L	G	F
Query Conservation																							.	.	.	.	.	.	.																			.												.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																			.												.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	D	I	G	V	L	V	I	S	A	R	R	G	E	F	E	A	G	F	E	R	G	G	Q	T	R	E	H	A	V	L	A	R	T	Q	G	I	N	H	L	V	V	V	I	N	K	M	D	E	P	S	V	Q	W	S	E	E	R	Y	K	E	C	V	D	K	L	S	M	F	L	R	R
Template Known Secondary structure		.	.	.	.	.	.	.	.		S									S	T	T					T	T	S	S	S													T	T		S	S								S	S	S	T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		345							.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	D	F	A	R	V	H	F	I	S	A	L	H	G	S	G	V
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	G	Y	N	S	K	T	D	V	K	Y	M	P	V	S	A	Y	T	G	Q	N	V
Template Known Secondary structure							T	T	T	T							B	T	T	T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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