Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6P5
Confidence99.90%DateThu Jan 5 11:03:38 GMT 2012
Rank37Aligned Residues171
% Identity18%Templatec1ni3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:ychf gtp-binding protein; PDBTitle: structure of the schizosaccharomyces pombe ychf gtpase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40......... 50.........60...
Predicted Secondary structure 



















.................






Query SS confidence 
















































. . . . . . . . . . . . . . . . .













Query Sequence  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEG. . . . . . . . . . . . . . . . . REFICIDTGGIDGT
Query Conservation 
 
 
 


  






 
 
     
 
    
 


          .................    





    
Alig confidence 
















































.................













Template Conservation     





 












    
 
 
 




 
  
 
 
 
 
   
             
 


 


  
Template Sequence  NNLKTGIVGXPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLTKG
Template Known Secondary structure  S


SSSSSTTTSTT

SS



TT



S

TGGG


Template Predicted Secondary structure 














































Template SS confidence 















































































   1920.........30.........40.........50.........60.........70.........80.........90........
 
   64.....70.........80.........90... ......100.........110.........120.........130..
Predicted Secondary structure 






...........












Query SS confidence 





























. . . . . . . . . . .






































Query Sequence  EDGVETRMAEQSLLAIEEADVVLFMVDARA. . . . . . . . . . . GLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDF
Query Conservation                    

 

 


   ...........     
      
       


 



         
 
Alig confidence 







.




















...........



















...........







Template Conservation 
  
 


.
 

  

 

 

 



             

  
   
  

   
   ........... 

   

Template Sequence  ASTGVGLG. NAFLSHVRAVDAIYQVVRAFDDAEIIHVEGDVDPIRDLSIIVDELLIKDAEF. . . . . . . . . . . VEKHLEGL
Template Known Secondary structure 

SSSSS
.TT
S


TT
SS

SSSS
...........
Template Predicted Secondary structure 



.


















...........
Template SS confidence 















































































   99100...... ...110.........120.........130.........140.........150........ .160......
 
   133......140.........150.........160.........170.........180...
Predicted Secondary structure 

















Query SS confidence 


















































Query Sequence  YSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWAQFE
Query Conservation    

      


  
 
   

  
   
 
                   
Alig confidence 


















































Template Conservation   
                   

  
   
 
         
   
   
 
Template Sequence  RKITSRGANTLEXKAKKEEQAIIEKVYQYLTETKQPIRKGDWSNREVEIIN
Template Known Secondary structure  TT

SS
SSSTT
S
GGGS


Template Predicted Secondary structure 






















Template SS confidence 


















































   167..170.........180.........190.........200.........210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions